FFCP PHASE1:Hg19::chr2:242052089..242052103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23178 | |EntrezGene=23178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17270 | |HGNC=17270 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_ENST00000489256_5end | |association_with_transcript=97bp_to_ENST00000489256_5end | ||
|cluster_id=chr2:242052089..242052103,- | |||
|coexpression_cluster_id=C1224 | |||
|description=CAGE_peak_9_at_PASK_5end | |description=CAGE_peak_9_at_PASK_5end | ||
|id=chr2:242052089..242052103,- | |id=chr2:242052089..242052103,- | ||
|ontology_enrichment_celltype=CL:0000838!5.02e-35!52;CL:0000542!3.28e-34!53;CL:0000051!3.28e-34!53;CL:0000791!7.93e-32!18;CL:0000789!7.93e-32!18;CL:0002420!7.93e-32!18;CL:0002419!7.93e-32!18;CL:0000790!7.93e-32!18;CL:0002087!1.30e-27!119;CL:0000738!5.01e-26!140;CL:0000084!4.75e-25!25;CL:0000827!4.75e-25!25;CL:0002031!2.04e-21!124;CL:0000037!3.15e-20!172;CL:0000566!3.15e-20!172;CL:0000988!1.41e-19!182;CL:0000625!6.82e-19!11;CL:0002032!7.84e-18!165;CL:0000837!7.84e-18!165;CL:0000624!3.80e-17!6;CL:0000842!2.72e-09!3;CL:0000898!4.22e-09!3;CL:0000623!4.97e-09!3;CL:0000825!4.97e-09!3;CL:0000945!6.89e-08!24;CL:0000826!6.89e-08!24;CL:0000080!1.33e-07!6;CL:0000224!4.78e-07!4 | |ontology_enrichment_celltype=CL:0000838!5.02e-35!52;CL:0000542!3.28e-34!53;CL:0000051!3.28e-34!53;CL:0000791!7.93e-32!18;CL:0000789!7.93e-32!18;CL:0002420!7.93e-32!18;CL:0002419!7.93e-32!18;CL:0000790!7.93e-32!18;CL:0002087!1.30e-27!119;CL:0000738!5.01e-26!140;CL:0000084!4.75e-25!25;CL:0000827!4.75e-25!25;CL:0002031!2.04e-21!124;CL:0000037!3.15e-20!172;CL:0000566!3.15e-20!172;CL:0000988!1.41e-19!182;CL:0000625!6.82e-19!11;CL:0002032!7.84e-18!165;CL:0000837!7.84e-18!165;CL:0000624!3.80e-17!6;CL:0000842!2.72e-09!3;CL:0000898!4.22e-09!3;CL:0000623!4.97e-09!3;CL:0000825!4.97e-09!3;CL:0000945!6.89e-08!24;CL:0000826!6.89e-08!24;CL:0000080!1.33e-07!6;CL:0000224!4.78e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.07e-29;18!CL:0000789;1.07e-29;18!CL:0002419;1.07e-29;18!CL:0000624;5.19e-29;6!CL:0000084;7.29e-26;25!CL:0000226;1.00e-20;3!CL:0000842;1.00e-20;3!CL:0000542;7.17e-15;53!CL:0000898;2.84e-10;3!CL:0000625;3.58e-10;11!CL:0000946;1.22e-08;1!CL:0000786;1.22e-08;1!CL:0000895;1.31e-08;1!CL:0000945;2.74e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.52e-31,52;CL:0000542,1.99e-30,53;CL:0000051,1.99e-30,53;CL:0000791,1.17e-29,18;CL:0000789,1.17e-29,18;CL:0002420,1.17e-29,18;CL:0002419,1.17e-29,18;CL:0000790,1.17e-29,18;CL:0000624,5.05e-29,6;CL:0000084,6.64e-26,25;CL:0000827,6.64e-26,25;CL:0000226,1.15e-20,3;CL:0000842,1.15e-20,3;CL:0002087,8.48e-18,115;CL:0000738,2.79e-16,136;CL:0000037,1.83e-12,168;CL:0000988,1.23e-11,177;CL:0002031,1.42e-11,120;CL:0000898,3.42e-10,3;CL:0000625,3.86e-10,11;CL:0002032,4.79e-09,161;CL:0000837,4.79e-09,161;CL:0000946,1.22e-08,1;CL:0000786,1.22e-08,1;CL:0000980,1.22e-08,1;CL:0000810,1.31e-08,1;CL:0000895,1.31e-08,1;CL:0002436,1.31e-08,1;CL:0002427,1.31e-08,1;CL:0002428,1.31e-08,1;CL:0002429,1.31e-08,1;CL:0002433,1.31e-08,1;CL:0002431,1.31e-08,1;CL:0002432,1.31e-08,1;CL:0000945,2.65e-07,24;CL:0000826,2.65e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-29;18!CL:0000051;7.17e-15;53!CL:0002427;1.31e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.05e-08;1!DOID:0050177;1.05e-08;1!DOID:0050427;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.05e-08,1;DOID:0050177,1.05e-08,1;DOID:0050427,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.96e-14!7;UBERON:0002106!7.46e-09!3;UBERON:0004854!7.46e-09!3;UBERON:0009034!7.46e-09!3;UBERON:0002095!7.46e-09!3;UBERON:0004782!7.46e-09!3;UBERON:0003281!7.46e-09!3;UBERON:0009664!7.46e-09!3;UBERON:0002296!7.46e-09!3;UBERON:0005602!7.46e-09!3;UBERON:0001179!7.46e-09!3;UBERON:0006293!7.46e-09!3;UBERON:0002193!3.43e-08!112;UBERON:0000178!5.41e-08!15;UBERON:0000179!5.41e-08!15;UBERON:0000463!5.41e-08!15;UBERON:0002390!1.31e-07!102;UBERON:0003061!1.31e-07!102;UBERON:0002370!6.60e-07!4;UBERON:0005058!6.60e-07!4;UBERON:0009113!6.60e-07!4;UBERON:0003295!6.60e-07!4;UBERON:0005562!6.60e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.42e-08;1!UBERON:0000029;2.42e-08;1!UBERON:0001961;2.42e-08;1!UBERON:0001744;2.42e-08;1!UBERON:0001042;2.42e-08;1!UBERON:0001735;2.42e-08;1!UBERON:0000178;2.38e-07;15!UBERON:0000179;2.38e-07;15!UBERON:0000463;2.38e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.02e-08,1;UBERON:0002372,2.50e-08,1;UBERON:0001961,2.50e-08,1;UBERON:0001744,2.50e-08,1;UBERON:0001735,2.50e-08,1;UBERON:0000178,2.60e-07,15;UBERON:0000179,2.60e-07,15;UBERON:0000463,2.60e-07,15 | |||
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| ||
|short_description=p9@PASK | |short_description=p9@PASK | ||
}} | }} |
Latest revision as of 09:33, 16 September 2015
Short description: | p9@PASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PASK_5end |
Coexpression cluster: | C1224_CD4_xeroderma_splenic_CD8_Peripheral_Natural_lymph |
Association with transcript: | 97bp_to_ENST00000489256_5end |
EntrezGene: | PASK |
HGNC: | 17270 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 2.02e-08 | 1 |
tonsil | 2.50e-08 | 1 |
mucosa-associated lymphoid tissue | 2.50e-08 | 1 |
lymphoid tissue | 2.50e-08 | 1 |
tonsillar ring | 2.50e-08 | 1 |
blood | 2.60e-07 | 15 |
haemolymphatic fluid | 2.60e-07 | 15 |
organism substance | 2.60e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.05e-08 | 1 |
monogenic disease | 1.05e-08 | 1 |
xeroderma pigmentosum | 1.05e-08 | 1 |