FFCP PHASE2:Hg19::chr4:157997240..157997259,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2743 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4329 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4329 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5GWE1,P48167 | ||
|association_with_transcript=-17bp_to_ENST00000541722,NM_000824,NM_001166061,uc003ipj.2_5end | |association_with_transcript=-17bp_to_ENST00000541722,NM_000824,NM_001166061,uc003ipj.2_5end | ||
|cluster_id=chr4:157997240..157997259,+ | |cluster_id=chr4:157997240..157997259,+ |
Latest revision as of 09:26, 16 September 2015
Short description: | p2@GLRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLRB_5end |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | -17bp_to_ENST00000541722, NM_000824, NM_001166061, uc003ipj.2_5end |
EntrezGene: | GLRB |
HGNC: | 4329 |
UniProt: | F5GWE1P48167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@GLRB |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.34e-72 | 56 |
neural rod | 1.34e-72 | 56 |
future spinal cord | 1.34e-72 | 56 |
neural keel | 1.34e-72 | 56 |
regional part of cerebral cortex | 5.51e-72 | 22 |
regional part of nervous system | 1.48e-71 | 53 |
regional part of brain | 1.48e-71 | 53 |
central nervous system | 8.08e-68 | 81 |
brain | 3.62e-67 | 68 |
future brain | 3.62e-67 | 68 |
Showing 1 to 10 of 67 entries