FFCP PHASE1:Hg19::chr11:123300882..123300896,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E9PS84 | |UniProt=E9PS84 | ||
|association_with_transcript=-161bp_to_ENST00000533341,uc001pyu.2_5end | |association_with_transcript=-161bp_to_ENST00000533341,uc001pyu.2_5end | ||
|cluster_id=chr11:123300882..123300896,+ | |||
|coexpression_cluster_id=C3107 | |coexpression_cluster_id=C3107 | ||
|description=CAGE_peak_6_at_ENST00000533341_5end,CAGE_peak_6_at_uc001pyu.2_5end | |description=CAGE_peak_6_at_ENST00000533341_5end,CAGE_peak_6_at_uc001pyu.2_5end | ||
|id=chr11:123300882..123300896,+ | |id=chr11:123300882..123300896,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.51e-07!75;CL:0002620!4.15e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.51e-07!75;CL:0002620!4.15e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.25e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.86e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.37e-08;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.28e-09!9;UBERON:0002097!4.82e-08!40;UBERON:0002199!9.97e-08!45;UBERON:0002416!9.97e-08!45 | |ontology_enrichment_uberon=UBERON:0001737!3.28e-09!9;UBERON:0002097!4.82e-08!40;UBERON:0002199!9.97e-08!45;UBERON:0002416!9.97e-08!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.25e-20;9!UBERON:0001557;3.25e-20;9!UBERON:0000072;2.64e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.27e-20,9;UBERON:0001557,5.09e-09,19;UBERON:0008947,1.74e-07,38;UBERON:0003258,1.74e-07,38 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0.659702600373432,0.598390972864896,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,1.43094374583205,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0.61417158655884,0,2.37600571456411,1.7308685049499,0,0,0.168336113954066,0,0,1.31693286264251,0.30648779579902,1.65261864797256,0.113432183160021,2.33206526395521,0.213557388818567,0,1.50045548042201,0.412210116953756,1.03056216018252,0,0.675105328965065,0.292311015483596,1.26216887122057,0.0920498986422993,0.161646056818812,1.42003837006646,0.705264687593482,1.01736355386293,0,0,0,1.09776335516636,1.06023814657188,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,1.41968160047813,1.01150814046861,2.16909926895134,1.7647035637183,1.52515610864684,2.37270619111097,1.8876383142423,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,1.05427273493442,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,0,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.887808626565635,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,3.47973196830029,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0.245040215981032,0,0.144269212976445,0,0,0.399158742865633,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0,0,3.30942754475111,0,5.83209226766509,0,0,0,0,0,0,0,0.435753854075961,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,1.72989514525104,1.14864144456001,0.269604531922708,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0,0,0.622129148383483,0.664653872707185,2.97892760287949,0.627865836814451,2.38944859545918,0,0,0,0,0,0,0,8.03077549699407,9.06307531868701,6.40500565015032,0,0,0.677942222341597,2.05562886970126,1.78843150532691,0,0.195551382734803,0.961905843018405,0,0,0,0,0,1.7286575758578,0,1.17847017308398,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0.858452096273142,0.446342914883745,0.268733889946905,0.360299883542404,0,0,0,0,0,1.43944664511834,0,0,0.160753148465019,0.962776056180637,1.24632101408756,0,0,0,0,0.157611414598396,0.681909645754975,0,2.86859742932552,0,0,0,0,0,0,0,0,0,1.19271615249795,0.566560457600628,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0,17.1552307320926,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.151230923763239,0.310874401165561,0.591420599958536,0.796483835818512,0,0.310525913752519,0,0.797525143673985,0,0,0,0,2.00033525122815,0.107410557042488,0.928067519756987,0.796191777397232,0.400027764663154,1.03018711554838,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0.999936979274649,0.106691729694141,0,0.567515953566836,0.552317850755522,0,0,0,0.107824811396682,0.629063767423586,0,0.169732529954025,0,0,1.67593475391973,0.318004350653419,0.157723490002507,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0.902523940191087,0.80682027481408,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,2.67850917939143,0,0,0,0,0,0.342976018874837,0,0.0657727735628491,1.53651993149159,1.00108261702862,0,0.157115589916002,0,0,0,0,1.21510125100316,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0.392616934229891,0,0,0.849635573439084,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,1.74540276136151,0,0.371995018166751,0.462175628631418,0,1.13549782351571,2.07604586731021,2.15387451719443,0.101988829741982,0.26721740526556,0,0,0.378893491091197,0.535928260312357,0,0.103432995861895,0,0.476128862927481,0.193766729508018,0.496597714366863,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0.659702600373432,0.598390972864896,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,1.43094374583205,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673588117878509,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0.61417158655884,0,2.37600571456411,1.7308685049499,0,0,0.168336113954066,0,0,1.31693286264251,0.30648779579902,1.65261864797256,0.113432183160021,2.33206526395521,0.213557388818567,0,1.50045548042201,0.412210116953756,1.03056216018252,0,0.675105328965065,0.292311015483596,1.26216887122057,0.0920498986422993,0.161646056818812,1.42003837006646,0.705264687593482,1.01736355386293,0,0,0,1.09776335516636,1.06023814657188,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,1.41968160047813,1.01150814046861,2.16909926895134,1.7647035637183,1.52515610864684,2.37270619111097,1.8876383142423,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,1.05427273493442,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,0,0.206768026122887,1.07857100409308,0.106727557803444,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.887808626565635,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,3.47973196830029,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0.245040215981032,0,0.144269212976445,0,0,0.399158742865633,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0,0,3.30942754475111,0,5.83209226766509,0,0,0,0,0,0,0,0.435753854075961,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,1.72989514525104,1.14864144456001,0.269604531922708,0,0.234264445725339,0,0,0.485560759068186,0,0,0,0,0,0.622129148383483,0.664653872707185,2.97892760287949,0.627865836814451,2.38944859545918,0,0,0,0,0,0,0,8.03077549699407,9.06307531868701,6.40500565015032,0,0,0.677942222341597,2.05562886970126,1.78843150532691,0,0.195551382734803,0.961905843018405,0,0,0,0,0,1.7286575758578,0,1.17847017308398,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0.858452096273142,0.446342914883745,0.268733889946905,0.360299883542404,0,0,0,0,0,1.43944664511834,0,0,0.160753148465019,0.962776056180637,1.24632101408756,0,0,0,0,0.157611414598396,0.681909645754975,0,2.86859742932552,0,0,0,0,0,0,0,0,0,1.19271615249795,0.566560457600628,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0,17.1552307320926,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.151230923763239,0.310874401165561,0.591420599958536,0.796483835818512,0,0.310525913752519,0,0.797525143673985,0,0,0,0,2.00033525122815,0.107410557042488,0.928067519756987,0.796191777397232,0.400027764663154,1.03018711554838,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0.999936979274649,0.106691729694141,0,0.567515953566836,0.552317850755522,0,0,0,0.107824811396682,0.629063767423586,0,0.169732529954025,0,0,1.67593475391973,0.318004350653419,0.157723490002507,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0.902523940191087,0.80682027481408,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,2.67850917939143,0,0,0,0,0,0.342976018874837,0,0.0657727735628491,1.53651993149159,1.00108261702862,0,0.157115589916002,0,0,0,0,1.21510125100316,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0.392616934229891,0,0,0.849635573439084,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,1.74540276136151,0,0.371995018166751,0.462175628631418,0,1.13549782351571,2.07604586731021,2.15387451719443,0.101988829741982,0.26721740526556,0,0,0.378893491091197,0.535928260312357,0,0.103432995861895,0,0.476128862927481,0.193766729508018,0.496597714366863,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p6@ENST00000533341,p6@uc001pyu.2 | |short_description=p6@ENST00000533341,p6@uc001pyu.2 | ||
}} | }} |
Latest revision as of 09:23, 16 September 2015
Short description: | p6@ENST00000533341, p6@uc001pyu.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000533341_5end, CAGE_peak_6_at_uc001pyu.2_5end |
Coexpression cluster: | C3107_medulloblastoma_Dendritic_Fibroblast_epitheloid_carcinoid_Hair_embryonic |
Association with transcript: | -161bp_to_ENST00000533341, uc001pyu.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.86e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.27e-20 | 9 |
upper respiratory tract | 5.09e-09 | 19 |
respiratory primordium | 1.74e-07 | 38 |
endoderm of foregut | 1.74e-07 | 38 |