FFCP PHASE1:Hg19::chr2:113483733..113483750,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:113483733..113483750,+ to FFCP PHASE1:Hg19::chr2:113483733..113483750,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284958 | |EntrezGene=284958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27678 | |HGNC=27678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000462854_5end | |||
|cluster_id=chr2:113483733..113483750,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_3_at_NT5DC4_5end | |||
|id=chr2:113483733..113483750,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.30e-09!254;CL:0000223!1.62e-08!59;CL:0000181!3.75e-08!12;CL:0000417!3.75e-08!12;CL:0000668!3.75e-08!12;CL:0000414!3.75e-08!12;CL:0000412!3.75e-08!12;CL:0000182!3.75e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.56e-15;1!CL:0000182;3.13e-11;12!CL:0000159;2.57e-08;2!CL:0002251;4.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.78e-15,1;CL:0000223,1.37e-11,58;CL:0000182,2.92e-11,12;CL:0000159,2.15e-08,2;CL:0002251,4.34e-07,20;CL:0000066,8.11e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.21e-17;13!UBERON:0004161;3.38e-12;11!UBERON:0001041;8.37e-12;30!CL:0000223;2.08e-07;58 | |||
|ontology_enrichment_disease=DOID:305!8.03e-17!106;DOID:0050687!6.55e-11!143;DOID:3493!1.41e-09!2;DOID:299!5.09e-09!25;DOID:162!1.26e-07!235;DOID:14566!2.49e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.95e-30;2!DOID:3111;9.98e-16;1!DOID:3603;9.98e-16;1!DOID:2152;2.56e-15;1!DOID:299;1.83e-09;25!DOID:7;2.19e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.02e-30,2;DOID:3111,9.99e-16,1;DOID:3603,9.99e-16,1;DOID:2152,1.78e-15,1;DOID:305,2.14e-12,106;DOID:299,1.70e-09,25;DOID:7,4.77e-09,39;DOID:0050687,6.60e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.42e-11!12;UBERON:0009497!9.45e-09!25;UBERON:0000015!9.45e-09!25;UBERON:0002423!9.45e-09!25;UBERON:0006235!9.45e-09!25;UBERON:0004161!9.45e-09!25;UBERON:0003350!6.03e-08!5;UBERON:0008835!6.25e-08!22;UBERON:0003894!6.25e-08!22;UBERON:0009854!1.53e-07!23;UBERON:0005409!2.39e-07!35;UBERON:0007499!7.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.56e-15;1!UBERON:0002423;2.55e-09;25!UBERON:0004909;2.57e-08;2!UBERON:0002107;2.71e-07;19!UBERON:0006925;2.71e-07;19!UBERON:0000344;4.66e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.78e-15,1;UBERON:0008835,1.50e-10,22;UBERON:0003894,1.50e-10,22;UBERON:0009854,4.21e-10,23;UBERON:0007499,2.58e-09,25;UBERON:0009497,2.58e-09,25;UBERON:0000015,2.58e-09,25;UBERON:0002423,2.58e-09,25;UBERON:0006235,2.58e-09,25;UBERON:0004161,2.58e-09,25;UBERON:0003929,3.35e-09,54;UBERON:0009856,5.77e-09,26;UBERON:0004921,8.78e-09,118;UBERON:0001007,1.10e-08,145;UBERON:0001555,1.10e-08,145;UBERON:0007026,1.10e-08,145;UBERON:0004909,2.15e-08,2;UBERON:0005911,5.50e-08,82;UBERON:0004119,9.06e-08,160;UBERON:0000925,9.06e-08,160;UBERON:0006595,9.06e-08,160;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19;UBERON:0000344,4.71e-07,20 | |||
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| ||
|short_description=p3@NT5DC4 | |||
}} | }} |
Latest revision as of 09:22, 16 September 2015
Short description: | p3@NT5DC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NT5DC4_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -69bp_to_ENST00000462854_5end |
EntrezGene: | NT5DC4 |
HGNC: | 27678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.78e-15 | 1 |
endodermal cell | 1.37e-11 | 58 |
hepatocyte | 2.92e-11 | 12 |
seromucus secreting cell | 2.15e-08 | 2 |
epithelial cell of alimentary canal | 4.34e-07 | 20 |
epithelial cell | 8.11e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.78e-15 | 1 |
hepatic diverticulum | 1.50e-10 | 22 |
liver primordium | 1.50e-10 | 22 |
digestive tract diverticulum | 4.21e-10 | 23 |
epithelial sac | 2.58e-09 | 25 |
epithelium of foregut-midgut junction | 2.58e-09 | 25 |
anatomical boundary | 2.58e-09 | 25 |
hepatobiliary system | 2.58e-09 | 25 |
foregut-midgut junction | 2.58e-09 | 25 |
septum transversum | 2.58e-09 | 25 |
gut epithelium | 3.35e-09 | 54 |
sac | 5.77e-09 | 26 |
subdivision of digestive tract | 8.78e-09 | 118 |
digestive system | 1.10e-08 | 145 |
digestive tract | 1.10e-08 | 145 |
primitive gut | 1.10e-08 | 145 |
epithelium of gonad | 2.15e-08 | 2 |
endo-epithelium | 5.50e-08 | 82 |
endoderm-derived structure | 9.06e-08 | 160 |
endoderm | 9.06e-08 | 160 |
presumptive endoderm | 9.06e-08 | 160 |
liver | 2.59e-07 | 19 |
digestive gland | 2.59e-07 | 19 |
liver bud | 2.59e-07 | 19 |
mucosa | 4.71e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.02e-30 | 2 |
cystadenocarcinoma | 9.99e-16 | 1 |
mucinous cystadenocarcinoma | 9.99e-16 | 1 |
ovary epithelial cancer | 1.78e-15 | 1 |
carcinoma | 2.14e-12 | 106 |
adenocarcinoma | 1.70e-09 | 25 |
disease of anatomical entity | 4.77e-09 | 39 |
cell type cancer | 6.60e-09 | 143 |