FFCP PHASE1:Hg19::chr11:123065992..123066002,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:123065992..123066002,- to FFCP PHASE1:Hg19::chr11:123065992..123066002,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79827 | |EntrezGene=79827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24039 | |HGNC=24039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000448775_5end | |||
|cluster_id=chr11:123065992..123066002,- | |||
|description=CAGE_peak_3_at_CLMP_5end | |||
|id=chr11:123065992..123066002,- | |||
|ontology_enrichment_celltype=CL:0000055!7.09e-29!180;CL:0000057!2.28e-19!75;CL:0000680!2.30e-11!57;CL:0000056!2.30e-11!57;CL:0000355!2.30e-11!57;CL:0000187!2.78e-10!54;CL:0002620!8.98e-10!23;CL:0000393!1.26e-09!60;CL:0000211!1.26e-09!60;CL:0000183!3.16e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.76e-08;12!CL:0000188;1.11e-07;9!CL:0002582;1.85e-07;3!CL:0000680;3.20e-07;7!CL:0000057;4.18e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.92e-17,76;CL:0000723,4.62e-09,433;CL:0000048,6.17e-09,427;CL:0000034,1.43e-08,441;CL:0000680,6.48e-08,58;CL:0000056,6.48e-08,58;CL:0000355,6.48e-08,58;CL:0002334,8.42e-08,12;CL:0000188,1.25e-07,9;CL:0002582,2.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.25e-17!83;UBERON:0002329!1.25e-17!83;UBERON:0003077!1.25e-17!83;UBERON:0003059!1.25e-17!83;UBERON:0007282!1.25e-17!83;UBERON:0009618!1.25e-17!83;UBERON:0007285!1.25e-17!83;UBERON:0004290!2.71e-14!70;UBERON:0003102!4.98e-14!95;UBERON:0000486!1.02e-12!82;UBERON:0001134!8.15e-11!61;UBERON:0002036!8.15e-11!61;UBERON:0003082!8.15e-11!61;UBERON:0002199!1.06e-10!45;UBERON:0002416!1.06e-10!45;UBERON:0002385!1.69e-10!63;UBERON:0001015!1.69e-10!63;UBERON:0000383!1.69e-10!63;UBERON:0005256!3.47e-09!143;UBERON:0002097!3.29e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.60e-07;16!UBERON:0002036;7.60e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.05e-11,73;UBERON:0002329,1.28e-10,71;UBERON:0003059,1.28e-10,71;UBERON:0007282,1.28e-10,71;UBERON:0004290,1.28e-10,71;UBERON:0009618,1.28e-10,71;UBERON:0003077,2.20e-10,72;UBERON:0007285,2.20e-10,72;UBERON:0000486,3.94e-10,83;UBERON:0007503,4.18e-09,78;UBERON:0003102,4.85e-08,99;UBERON:0001134,4.12e-07,62;UBERON:0002036,4.12e-07,62;UBERON:0003082,4.12e-07,62;UBERON:0002199,7.21e-07,46;UBERON:0002416,7.21e-07,46;UBERON:0002385,9.46e-07,64;UBERON:0001015,9.46e-07,64;UBERON:0000383,9.46e-07,64 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0.361439152384566,0,0.869079113764942,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,1.2663051166458,0.926864265692532,0.860509862246441,1.06400514659507,0.560677600142307,1.06748995729705,0,1.24484414159907,0.67355336034844,0.490385709340376,0,0.576175924479999,0,3.43376084513353,0.570471821544449,2.09228152772521,2.46612447151906,2.10434827678571,0.842704840213491,1.63323337003915,1.10550885580591,2.06651562351531,0,0.989067717114227,0,0,0.673344455816265,1.25118519871964,0.554128230968366,0.877955241761676,1.22595118319608,2.85452311922534,0.453728732640084,0.179389635688862,0.213557388818567,0.635795703478686,1.20036438433761,1.23663035086127,1.03056216018252,0.37223371266318,2.19409231913646,0.68205903612839,0.504867548488229,0.828449087780694,0.161646056818812,1.06502877754984,0.705264687593482,0.508681776931463,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.504641701751257,0,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.591534000199219,1.68584690078102,0.482022059766964,0.330881918197182,0.871517776369625,1.18635309555548,1.48314438976181,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0.329250856225877,1.1240175325762,0.402115889646523,0.185176890317059,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.80672114403045,0.517086863031111,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,0,0.714889968290738,1.08524321078289,0,0.325736184293735,0,0,0.301439377059586,0,1.19967589418468,0,0,0,0,0,2.85273810081437,0.289562613335158,1.02738161275192,1.25342674267927,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.10422342547226,0,1.35632511849868,0.831883446123229,1.78428988797162,0.946214490203608,1.40569697991256,0,0,2.0694614258501,0.664225598535437,0.737476674166813,1.47702144595741,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,1.12264037773229,0.128139149255701,1.02341449813341,0.160853921143607,0,2.7757744884478,1.9531789784444,1.23190734020714,2.59627214591811,2.32420756919918,0.120859449591622,0,1.01289087829486,0.803701137152247,1.45672934405374,1.04899531967539,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.640986253728404,0.577566499444116,0.574265537996172,0,0,0.96670718292122,1.23238893691716,1.99554777143968,1.24052915236078,0.966782203814463,1.0151168573996,1.27839941124151,0.0890320356467374,0.495854746082934,0.576570202095319,0.510450849978337,0.6069466851333,0,0.94443704049192,2.0911118104818,0.308033580176089,0,0,0.18532421910392,1.43124886741991,0.372158369359667,0,0.762520775695299,0.511795582622668,1.28381696410176,0,0.78494864019923,1.43897966066652,0.274537029736055,1.29593642580255,0.404364963146632,1.58510321173008,0.842516912477962,0.48763373908959,1.70599442741899,0,0.818999468447914,0.848432591722276,1.13008116620243,0,2.65375590096488,0,0,1.31178950409327,0.405820753925408,0.92947049429925,0.281695602532241,0.430234056612155,0.491245205065606,0,0.709522128141196,1.68886108238131,1.64647446479951,0.379473173765715,1.04980416073495,0.577332676353072,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,1.59398390600856,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0.568967241427498,0,0,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0.435753854075961,0,0.307801034015188,0.227884111694002,0.46112780877612,0.448788222048861,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.706765357169704,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,1.24807205711825,0,0.0979923974143777,0.0870592065804026,0.17472666824203,1.89184635718778,1.06431964417994,0.219267951258557,0.574808199372465,0.193978032976839,0,0.451961481561065,1.09633539717401,1.78843150532691,0,0,0.801588202515337,0.213452994739353,0,0.288180834308212,0,0,0.432164393964449,0,0.235694034616795,0,0.523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| ||
|short_description=p3@CLMP | |||
}} | }} |
Latest revision as of 09:09, 16 September 2015
Short description: | p3@CLMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLMP_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000448775_5end |
EntrezGene: | CLMP |
HGNC: | 24039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.92e-17 | 76 |
somatic stem cell | 4.62e-09 | 433 |
multi fate stem cell | 6.17e-09 | 427 |
stem cell | 1.43e-08 | 441 |
muscle precursor cell | 6.48e-08 | 58 |
myoblast | 6.48e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.48e-08 | 58 |
preadipocyte | 8.42e-08 | 12 |
cell of skeletal muscle | 1.25e-07 | 9 |
visceral preadipocyte | 2.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.05e-11 | 73 |
somite | 1.28e-10 | 71 |
presomitic mesoderm | 1.28e-10 | 71 |
presumptive segmental plate | 1.28e-10 | 71 |
dermomyotome | 1.28e-10 | 71 |
trunk paraxial mesoderm | 1.28e-10 | 71 |
paraxial mesoderm | 2.20e-10 | 72 |
presumptive paraxial mesoderm | 2.20e-10 | 72 |
multilaminar epithelium | 3.94e-10 | 83 |
epithelial vesicle | 4.18e-09 | 78 |
surface structure | 4.85e-08 | 99 |
skeletal muscle tissue | 4.12e-07 | 62 |
striated muscle tissue | 4.12e-07 | 62 |
myotome | 4.12e-07 | 62 |
integument | 7.21e-07 | 46 |
integumental system | 7.21e-07 | 46 |
muscle tissue | 9.46e-07 | 64 |
musculature | 9.46e-07 | 64 |
musculature of body | 9.46e-07 | 64 |