FFCP PHASE1:Hg19::chr6:155538081..155538084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26230 | |EntrezGene=26230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11806 | |HGNC=11806 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVF5 | |UniProt=Q8IVF5 | ||
|association_with_transcript=-12bp_to_NM_001010927,uc003qqh.2_5end | |association_with_transcript=-12bp_to_NM_001010927,uc003qqh.2_5end | ||
|cluster_id=chr6:155538081..155538084,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_23_at_TIAM2_5end | |description=CAGE_peak_23_at_TIAM2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.95e-95!32;UBERON:0001893!8.82e-90!34;UBERON:0001950!5.89e-88!20;UBERON:0002791!1.45e-83!33;UBERON:0002020!4.43e-81!34;UBERON:0003528!4.43e-81!34;UBERON:0002619!4.61e-80!22;UBERON:0002780!3.15e-74!41;UBERON:0001890!3.15e-74!41;UBERON:0006240!3.15e-74!41;UBERON:0003080!2.03e-72!42;UBERON:0000956!1.69e-70!25;UBERON:0000203!1.69e-70!25;UBERON:0001049!9.28e-53!57;UBERON:0005068!9.28e-53!57;UBERON:0006241!9.28e-53!57;UBERON:0007135!9.28e-53!57;UBERON:0002616!7.04e-51!59;UBERON:0003056!4.04e-49!61;UBERON:0001017!5.43e-47!82;UBERON:0000955!6.84e-47!69;UBERON:0006238!6.84e-47!69;UBERON:0005743!1.12e-44!86;UBERON:0000073!3.62e-40!94;UBERON:0001016!3.62e-40!94;UBERON:0003075!1.51e-37!86;UBERON:0007284!1.51e-37!86;UBERON:0001872!2.38e-37!5;UBERON:0002346!9.93e-36!90;UBERON:0000200!9.47e-32!6;UBERON:0007023!2.47e-30!115;UBERON:0000033!1.42e-27!123;UBERON:0000153!3.96e-26!129;UBERON:0007811!3.96e-26!129;UBERON:0002021!3.75e-24!5;UBERON:0002771!1.15e-23!3;UBERON:0001871!2.16e-23!7;UBERON:0004121!6.14e-23!169;UBERON:0000924!2.53e-22!173;UBERON:0006601!2.53e-22!173;UBERON:0002420!5.28e-20!9;UBERON:0007245!5.28e-20!9;UBERON:0010009!5.28e-20!9;UBERON:0010011!5.28e-20!9;UBERON:0000454!5.28e-20!9;UBERON:0000369!4.48e-17!4;UBERON:0002435!4.48e-17!4;UBERON:0000204!4.48e-17!4;UBERON:0010082!4.48e-17!4;UBERON:0009663!8.12e-17!7;UBERON:0002308!3.95e-13!9;UBERON:0000125!3.95e-13!9;UBERON:0000025!4.93e-13!194;UBERON:0000064!4.13e-11!219;UBERON:0005383!7.30e-11!3;UBERON:0005382!7.30e-11!3;UBERON:0004111!9.59e-10!241;UBERON:0002022!3.87e-09!1;UBERON:0007190!4.52e-09!1;UBERON:0002581!6.65e-09!1;UBERON:0003112!8.36e-09!1;UBERON:0000032!8.36e-09!1;UBERON:0005253!8.36e-09!1;UBERON:0003128!8.36e-09!1;UBERON:0002241!8.36e-09!1;UBERON:0001703!8.36e-09!1;UBERON:0004761!8.36e-09!1;UBERON:0009617!8.36e-09!1;UBERON:0002902!1.05e-08!1;UBERON:0009899!1.05e-08!1;UBERON:0000483!1.20e-08!309;UBERON:0000477!1.33e-08!286;UBERON:0000119!1.60e-08!312;UBERON:0001882!1.78e-08!1;UBERON:0005403!1.78e-08!1;UBERON:0001874!1.91e-08!1;UBERON:0000475!1.58e-07!365 | |ontology_enrichment_uberon=UBERON:0001869!1.95e-95!32;UBERON:0001893!8.82e-90!34;UBERON:0001950!5.89e-88!20;UBERON:0002791!1.45e-83!33;UBERON:0002020!4.43e-81!34;UBERON:0003528!4.43e-81!34;UBERON:0002619!4.61e-80!22;UBERON:0002780!3.15e-74!41;UBERON:0001890!3.15e-74!41;UBERON:0006240!3.15e-74!41;UBERON:0003080!2.03e-72!42;UBERON:0000956!1.69e-70!25;UBERON:0000203!1.69e-70!25;UBERON:0001049!9.28e-53!57;UBERON:0005068!9.28e-53!57;UBERON:0006241!9.28e-53!57;UBERON:0007135!9.28e-53!57;UBERON:0002616!7.04e-51!59;UBERON:0003056!4.04e-49!61;UBERON:0001017!5.43e-47!82;UBERON:0000955!6.84e-47!69;UBERON:0006238!6.84e-47!69;UBERON:0005743!1.12e-44!86;UBERON:0000073!3.62e-40!94;UBERON:0001016!3.62e-40!94;UBERON:0003075!1.51e-37!86;UBERON:0007284!1.51e-37!86;UBERON:0001872!2.38e-37!5;UBERON:0002346!9.93e-36!90;UBERON:0000200!9.47e-32!6;UBERON:0007023!2.47e-30!115;UBERON:0000033!1.42e-27!123;UBERON:0000153!3.96e-26!129;UBERON:0007811!3.96e-26!129;UBERON:0002021!3.75e-24!5;UBERON:0002771!1.15e-23!3;UBERON:0001871!2.16e-23!7;UBERON:0004121!6.14e-23!169;UBERON:0000924!2.53e-22!173;UBERON:0006601!2.53e-22!173;UBERON:0002420!5.28e-20!9;UBERON:0007245!5.28e-20!9;UBERON:0010009!5.28e-20!9;UBERON:0010011!5.28e-20!9;UBERON:0000454!5.28e-20!9;UBERON:0000369!4.48e-17!4;UBERON:0002435!4.48e-17!4;UBERON:0000204!4.48e-17!4;UBERON:0010082!4.48e-17!4;UBERON:0009663!8.12e-17!7;UBERON:0002308!3.95e-13!9;UBERON:0000125!3.95e-13!9;UBERON:0000025!4.93e-13!194;UBERON:0000064!4.13e-11!219;UBERON:0005383!7.30e-11!3;UBERON:0005382!7.30e-11!3;UBERON:0004111!9.59e-10!241;UBERON:0002022!3.87e-09!1;UBERON:0007190!4.52e-09!1;UBERON:0002581!6.65e-09!1;UBERON:0003112!8.36e-09!1;UBERON:0000032!8.36e-09!1;UBERON:0005253!8.36e-09!1;UBERON:0003128!8.36e-09!1;UBERON:0002241!8.36e-09!1;UBERON:0001703!8.36e-09!1;UBERON:0004761!8.36e-09!1;UBERON:0009617!8.36e-09!1;UBERON:0002902!1.05e-08!1;UBERON:0009899!1.05e-08!1;UBERON:0000483!1.20e-08!309;UBERON:0000477!1.33e-08!286;UBERON:0000119!1.60e-08!312;UBERON:0001882!1.78e-08!1;UBERON:0005403!1.78e-08!1;UBERON:0001874!1.91e-08!1;UBERON:0000475!1.58e-07!365 | ||
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|short_description=p23@TIAM2 | |short_description=p23@TIAM2 | ||
}} | }} |
Latest revision as of 09:07, 16 September 2015
Short description: | p23@TIAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TIAM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -12bp_to_NM_001010927, uc003qqh.2_5end |
EntrezGene: | TIAM2 |
HGNC: | 11806 |
UniProt: | Q8IVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 7.05e-34 | 2 |
neocortex | 3.84e-29 | 20 |
regional part of cerebral cortex | 1.01e-26 | 22 |
cerebral cortex | 8.76e-24 | 25 |
pallium | 8.76e-24 | 25 |
frontal cortex | 4.09e-23 | 3 |
regional part of telencephalon | 5.33e-19 | 32 |
cerebral hemisphere | 5.33e-19 | 32 |
brain grey matter | 5.55e-18 | 34 |
gray matter | 5.55e-18 | 34 |
telencephalon | 5.55e-18 | 34 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
parietal lobe | 1.40e-14 | 5 |
occipital lobe | 1.60e-14 | 5 |
gyrus | 2.74e-12 | 6 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |