FFCP PHASE1:Hg19::chr5:150827143..150827196,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:150827143..150827196,+ to FFCP PHASE1:Hg19::chr5:150827143..150827196,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=206358 | |EntrezGene=206358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18761 | |HGNC=18761 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z2H8,C9JSK7,E5RG64,E7EW39,Q1LZ56 | |UniProt=Q7Z2H8,C9JSK7,E5RG64,E7EW39,Q1LZ56 | ||
|association_with_transcript=0bp_to_ENST00000243389,ENST00000456739,ENST00000517945,ENST00000521925,NM_078483,uc003luc.2,uc010jhw.1_5end | |||
|cluster_id=chr5:150827143..150827196,+ | |||
|description=CAGE_peak_1_at_SLC36A1_5end | |||
|id=chr5:150827143..150827196,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.32e-29!76;CL:0000839!4.04e-27!70;CL:0000557!1.03e-25!71;CL:0002194!2.62e-25!63;CL:0000576!2.62e-25!63;CL:0000040!2.62e-25!63;CL:0000559!2.62e-25!63;CL:0002009!1.97e-24!65;CL:0002057!1.83e-19!42;CL:0000860!8.32e-19!45;CL:0000763!3.87e-17!112;CL:0000049!3.87e-17!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.35e-18;39!CL:0000234;5.35e-18;39!CL:0000860;1.83e-17;33!CL:0002057;1.83e-17;33!CL:0000576;2.21e-14;48!CL:0000766;6.43e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.81e-29,72;CL:0000839,3.38e-27,66;CL:0000557,9.72e-26,67;CL:0002194,1.99e-25,59;CL:0000576,1.99e-25,59;CL:0000040,1.99e-25,59;CL:0000559,1.99e-25,59;CL:0002009,1.70e-24,61;CL:0000473,1.89e-23,48;CL:0000234,1.89e-23,48;CL:0000860,1.83e-19,42;CL:0002057,1.83e-19,42;CL:0000763,8.30e-17,108;CL:0000049,8.30e-17,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.74e-22!80;UBERON:0001474!1.41e-21!86;UBERON:0002390!2.54e-21!102;UBERON:0003061!2.54e-21!102;UBERON:0002193!3.59e-18!112;UBERON:0004765!1.90e-17!101;UBERON:0001434!1.90e-17!101;UBERON:0002405!6.04e-14!115;UBERON:0000062!1.23e-11!511;UBERON:0007023!7.80e-11!115;UBERON:0001950!3.26e-10!20;UBERON:0001017!8.51e-10!82;UBERON:0002619!1.36e-09!22;UBERON:0000468!3.06e-09!659;UBERON:0000073!3.73e-09!94;UBERON:0001016!3.73e-09!94;UBERON:0002616!5.42e-09!59;UBERON:0005743!7.24e-09!86;UBERON:0001049!7.56e-09!57;UBERON:0005068!7.56e-09!57;UBERON:0006241!7.56e-09!57;UBERON:0007135!7.56e-09!57;UBERON:0000467!8.37e-09!625;UBERON:0000955!8.38e-09!69;UBERON:0006238!8.38e-09!69;UBERON:0001893!9.82e-09!34;UBERON:0000480!1.01e-08!626;UBERON:0002020!2.60e-08!34;UBERON:0003528!2.60e-08!34;UBERON:0002791!3.12e-08!33;UBERON:0001869!3.33e-08!32;UBERON:0000923!9.36e-08!604;UBERON:0005291!9.36e-08!604;UBERON:0006598!9.36e-08!604;UBERON:0002532!9.36e-08!604;UBERON:0002050!9.51e-08!605;UBERON:0005423!9.51e-08!605;UBERON:0000956!1.18e-07!25;UBERON:0000203!1.18e-07!25;UBERON:0002780!1.63e-07!41;UBERON:0001890!1.63e-07!41;UBERON:0006240!1.63e-07!41;UBERON:0002204!2.02e-07!167;UBERON:0000922!2.25e-07!612;UBERON:0003080!6.42e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.81e-10;20!UBERON:0002619;1.23e-09;22!UBERON:0000956;1.09e-07;25!UBERON:0000203;1.09e-07;25!UBERON:0001893;1.59e-07;34!UBERON:0001869;2.52e-07;32!UBERON:0002791;4.50e-07;32!UBERON:0003528;5.93e-07;34!UBERON:0002020;5.93e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.76e-22,76;UBERON:0001474,2.17e-21,82;UBERON:0002390,4.67e-21,98;UBERON:0003061,4.67e-21,98;UBERON:0002405,2.89e-18,93;UBERON:0002193,7.50e-18,108;UBERON:0004765,4.13e-16,90;UBERON:0001434,4.94e-15,100;UBERON:0001016,1.57e-10,89;UBERON:0007023,1.69e-10,114;UBERON:0001017,2.64e-10,81;UBERON:0001950,3.26e-10,20;UBERON:0002619,1.36e-09,22;UBERON:0001049,1.94e-09,56;UBERON:0005068,1.94e-09,56;UBERON:0006241,1.94e-09,56;UBERON:0007135,1.94e-09,56;UBERON:0000955,2.53e-09,68;UBERON:0006238,2.53e-09,68;UBERON:0000073,2.57e-09,53;UBERON:0002616,2.57e-09,53;UBERON:0001893,9.82e-09,34;UBERON:0003528,2.60e-08,34;UBERON:0002020,2.60e-08,34;UBERON:0000923,3.19e-08,560;UBERON:0010316,3.19e-08,560;UBERON:0005291,3.19e-08,560;UBERON:0006598,3.19e-08,560;UBERON:0010317,3.19e-08,560;UBERON:0002532,3.19e-08,560;UBERON:0001869,3.33e-08,32;UBERON:0002050,5.14e-08,564;UBERON:0002791,5.17e-08,32;UBERON:0000956,1.18e-07,25;UBERON:0000203,1.18e-07,25;UBERON:0002780,1.63e-07,41;UBERON:0001890,1.63e-07,41;UBERON:0003080,1.63e-07,41;UBERON:0006240,1.63e-07,41;UBERON:0005423,1.91e-07,581;UBERON:0000922,6.00e-07,592 | |||
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| ||
|short_description=p1@SLC36A1 | |||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p1@SLC36A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC36A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000243389, ENST00000456739, ENST00000517945, ENST00000521925, NM_078483, uc003luc.2, uc010jhw.1_5end |
EntrezGene: | SLC36A1 |
HGNC: | 18761 |
UniProt: | Q7Z2H8C9JSK7E5RG64E7EW39Q1LZ56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.81e-29 | 72 |
myeloid lineage restricted progenitor cell | 3.38e-27 | 66 |
granulocyte monocyte progenitor cell | 9.72e-26 | 67 |
monopoietic cell | 1.99e-25 | 59 |
monocyte | 1.99e-25 | 59 |
monoblast | 1.99e-25 | 59 |
promonocyte | 1.99e-25 | 59 |
macrophage dendritic cell progenitor | 1.70e-24 | 61 |
defensive cell | 1.89e-23 | 48 |
phagocyte | 1.89e-23 | 48 |
classical monocyte | 1.83e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-19 | 42 |
myeloid cell | 8.30e-17 | 108 |
common myeloid progenitor | 8.30e-17 | 108 |