FFCP PHASE1:Hg19::chrX:73049003..73049016,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=285bp_to_ENST00000433732_5end | |association_with_transcript=285bp_to_ENST00000433732_5end | ||
|cluster_id=chrX:73049003..73049016,- | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_13_at_XIST_5end | |description=CAGE_peak_13_at_XIST_5end | ||
|id=chrX:73049003..73049016,- | |id=chrX:73049003..73049016,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-09;33!CL:0002057;1.15e-09;33!CL:0000473;1.20e-07;39!CL:0000234;1.20e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.50e-07,42;CL:0002057,3.50e-07,42;CL:0000473,5.42e-07,48;CL:0000234,5.42e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;8.84e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.68e-13!57;UBERON:0005068!7.68e-13!57;UBERON:0006241!7.68e-13!57;UBERON:0007135!7.68e-13!57;UBERON:0002780!3.58e-11!41;UBERON:0001890!3.58e-11!41;UBERON:0006240!3.58e-11!41;UBERON:0002616!4.11e-11!59;UBERON:0003080!1.11e-10!42;UBERON:0002020!2.10e-10!34;UBERON:0003528!2.10e-10!34;UBERON:0002791!1.10e-09!33;UBERON:0001893!3.52e-09!34;UBERON:0003075!2.03e-08!86;UBERON:0007284!2.03e-08!86;UBERON:0001017!2.07e-08!82;UBERON:0001869!2.66e-08!32;UBERON:0000955!4.38e-08!69;UBERON:0006238!4.38e-08!69;UBERON:0002346!4.86e-08!90;UBERON:0005743!1.82e-07!86;UBERON:0007023!3.69e-07!115;UBERON:0003056!6.06e-07!61;UBERON:0000956!6.49e-07!25;UBERON:0000203!6.49e-07!25;UBERON:0000062!7.71e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!7.68e-13!57;UBERON:0005068!7.68e-13!57;UBERON:0006241!7.68e-13!57;UBERON:0007135!7.68e-13!57;UBERON:0002780!3.58e-11!41;UBERON:0001890!3.58e-11!41;UBERON:0006240!3.58e-11!41;UBERON:0002616!4.11e-11!59;UBERON:0003080!1.11e-10!42;UBERON:0002020!2.10e-10!34;UBERON:0003528!2.10e-10!34;UBERON:0002791!1.10e-09!33;UBERON:0001893!3.52e-09!34;UBERON:0003075!2.03e-08!86;UBERON:0007284!2.03e-08!86;UBERON:0001017!2.07e-08!82;UBERON:0001869!2.66e-08!32;UBERON:0000955!4.38e-08!69;UBERON:0006238!4.38e-08!69;UBERON:0002346!4.86e-08!90;UBERON:0005743!1.82e-07!86;UBERON:0007023!3.69e-07!115;UBERON:0003056!6.06e-07!61;UBERON:0000956!6.49e-07!25;UBERON:0000203!6.49e-07!25;UBERON:0000062!7.71e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.03e-07;41!UBERON:0001890;5.03e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.60e-08,41;UBERON:0001890,1.60e-08,41;UBERON:0003080,1.60e-08,41;UBERON:0006240,1.60e-08,41;UBERON:0001049,2.92e-08,56;UBERON:0005068,2.92e-08,56;UBERON:0006241,2.92e-08,56;UBERON:0007135,2.92e-08,56;UBERON:0000073,6.96e-08,53;UBERON:0002616,6.96e-08,53 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,1.0007329835313,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0,0.687720651731561,0.57470412614962,0.787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,1.94336199611388,0,1.01778767145695,1.51150377475524,0,1.16214518452842,0.411167888021826,0,1.1507695692886,2.0492856522328,0,1.03423704220986,1.29096936716765,0,2.07066573496865,0.545812300115692,0,0.918251677112708,0,0,0.329851300186716,1.59570926097305,0,1.7412554317715,2.8369261234557,0,0.75374599577023,3.12889751052121,0,1.21079900526674,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0,1.49319135678314,0,0,0,0.324547393654683,0.870648686496336,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,1.10298924103761,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0,0,0,0,0,0,0,0,0,0,0.625592599359821,0,0.438977620880838,0,0,0,1.25572744982203,0.85422955527427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.704387472105808,0.829312462163088,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.797814349754612,0,0,1.41849132023278,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.799783929456456,0,0,2.10833939483032,0,0,0,0.434343920002738,0,1.07436577943937,0.784596007954691,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,1.07057393278297,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0.920771839728375,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.532685175939381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,0.495056999523528,0,0,0,0.386682873168488,0.462145851343933,1.38153307253517,0,0,1.16013355131383,0.767039646744908,0.712256285173899,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0.42793898803392,0,0,0,1.64722217841633,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.728163130497081,0,0,0,0,0,0.994147647766298,1.1253553312841,1.11308705022906,0,0,0,0,1.76352923497993,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,1.08536794762867,1.52581736317083,1.43753037910592,0,0,0,0.557694977114413,0.846452843541768,2.96249345202203,0.23056390438806,0,0,0,0,1.06606955203727,0,0.784901281975124,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.53036380815245,0.63186579628488,5.41164309892173,5.80653871824584,0,0.330991955875499,0.313932918407225,0,0,0.832048038078832,0,0.0979923974143777,0,0,0,0,0,0,0,0.264768380074501,0.677942222341597,0,0.19871461170299,0.0633107959558787,2.15106521008283,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0.429765441419957,0,0,0,0,1.99679000498991,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,1.51293380256957,0.83088067605837,1.799791132412,0.77380195455795,0.121499113316049,3.01891218839339,0.394028536495991,0.0524545881349981,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,7.32668493677313,0,0,0,0.387848869084652,0.92562821219883,0,0,0,0,0,0,1.18566979138767,0,0,0,0.2506898940227,0,0,0,0.886068179966986,1.83039397352945,0.3755727921195,0.573409195690071,0.665574309221114,0,0,0,0.303298235083296,0,0.235265819698172,0,1.59413131471908,0.149254802886874,0.934853239388898,1.66441758450784,0,0,0,0,0.756154618816195,0,0,0,0.899606224327209,0.310525913752519,0,0.797525143673985,2.08698024724694,0,1.14241563650639,0,0.363697318405119,0.859284456339908,0,1.19428766609585,4.40030541129469,0,0,0,1.15571898244382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0.389720617678777,0.132864840313363,0,0,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0.558644917973244,1.27201740261367,0,0,4.93746321166957,3.6749457282384,0.0642292250964595,0,1.43670473151436,0,0,0.0691572524642179,1.13032951942296,0,0,0,0,1.27078232765372,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,2.27355476151302,0.19024743058172,8.20462213527329,0,0.992422356778588,0,0,1.60710550763486,1.3451348888753,2.42786241694653,0.455324382702595,0.443511850813194,1.38280785066935,0.514464028312255,0.0679697329768317,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0.801711364730253,0.828864656652147,1.19502933965765,2.07377898544228,0,0,0,0,3.89481676524885,0.31020638566432,1.91107787795487,0,0,0,0,0.307988420568741,0,0.485710993059139,0.701818390386317,0,0,0,0,0,0.154348316215889,0,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0.128915775947154,0.199882311849858,0,0.352894871715692,0,4.3820183294791,0,1.86341458096887,0,0,0.872701380680755,0,0,0.462175628631418,0,0.378499274505237,0,2.15387451719443,0,0.534434810531121,0,0,0,0,0,1.03432995861895,0,0,0,0.372448285775147,0,0.509177266225319,0,0,1.36893320434112,0.0673520530145875,0.143444410785353,0,0,0,1.9307228228694,0,0,0.977931553462932,1.62758471326295,0,0,1.28227396921293 | |phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,1.0007329835313,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0,0.687720651731561,0.57470412614962,0.787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,1.94336199611388,0,1.01778767145695,1.51150377475524,0,1.16214518452842,0.411167888021826,0,1.1507695692886,2.0492856522328,0,1.03423704220986,1.29096936716765,0,2.07066573496865,0.545812300115692,0,0.918251677112708,0,0,0.329851300186716,1.59570926097305,0,1.7412554317715,2.8369261234557,0,0.75374599577023,3.12889751052121,0,1.21079900526674,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0,1.49319135678314,0,0,0,0.324547393654683,0.870648686496336,0,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,1.10298924103761,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0,0,0,0,0,0,0,0,0,0,0.625592599359821,0,0.438977620880838,0,0,0,1.25572744982203,0.85422955527427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.704387472105808,0.829312462163088,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.797814349754612,0,0,1.41849132023278,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.799783929456456,0,0,2.10833939483032,0,0,0,0.434343920002738,0,1.07436577943937,0.784596007954691,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,1.07057393278297,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0.920771839728375,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.532685175939381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,0.495056999523528,0,0,0,0.386682873168488,0.462145851343933,1.38153307253517,0,0,1.16013355131383,0.767039646744908,0.712256285173899,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0.42793898803392,0,0,0,1.64722217841633,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.728163130497081,0,0,0,0,0,0.994147647766298,1.1253553312841,1.11308705022906,0,0,0,0,1.76352923497993,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0,0,0,0,1.08536794762867,1.52581736317083,1.43753037910592,0,0,0,0.557694977114413,0.846452843541768,2.96249345202203,0.23056390438806,0,0,0,0,1.06606955203727,0,0.784901281975124,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.53036380815245,0.63186579628488,5.41164309892173,5.80653871824584,0,0.330991955875499,0.313932918407225,0,0,0.832048038078832,0,0.0979923974143777,0,0,0,0,0,0,0,0.264768380074501,0.677942222341597,0,0.19871461170299,0.0633107959558787,2.15106521008283,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0.429765441419957,0,0,0,0,1.99679000498991,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,1.51293380256957,0.83088067605837,1.799791132412,0.77380195455795,0.121499113316049,3.01891218839339,0.394028536495991,0.0524545881349981,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,7.32668493677313,0,0,0,0.387848869084652,0.92562821219883,0,0,0,0,0,0,1.18566979138767,0,0,0,0.2506898940227,0,0,0,0.886068179966986,1.83039397352945,0.3755727921195,0.573409195690071,0.665574309221114,0,0,0,0.303298235083296,0,0.235265819698172,0,1.59413131471908,0.149254802886874,0.934853239388898,1.66441758450784,0,0,0,0,0.756154618816195,0,0,0,0.899606224327209,0.310525913752519,0,0.797525143673985,2.08698024724694,0,1.14241563650639,0,0.363697318405119,0.859284456339908,0,1.19428766609585,4.40030541129469,0,0,0,1.15571898244382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0.389720617678777,0.132864840313363,0,0,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0.558644917973244,1.27201740261367,0,0,4.93746321166957,3.6749457282384,0.0642292250964595,0,1.43670473151436,0,0,0.0691572524642179,1.13032951942296,0,0,0,0,1.27078232765372,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,2.27355476151302,0.19024743058172,8.20462213527329,0,0.992422356778588,0,0,1.60710550763486,1.3451348888753,2.42786241694653,0.455324382702595,0.443511850813194,1.38280785066935,0.514464028312255,0.0679697329768317,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0.801711364730253,0.828864656652147,1.19502933965765,2.07377898544228,0,0,0,0,3.89481676524885,0.31020638566432,1.91107787795487,0,0,0,0,0.307988420568741,0,0.485710993059139,0.701818390386317,0,0,0,0,0,0.154348316215889,0,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0.128915775947154,0.199882311849858,0,0.352894871715692,0,4.3820183294791,0,1.86341458096887,0,0,0.872701380680755,0,0,0.462175628631418,0,0.378499274505237,0,2.15387451719443,0,0.534434810531121,0,0,0,0,0,1.03432995861895,0,0,0,0.372448285775147,0,0.509177266225319,0,0,1.36893320434112,0.0673520530145875,0.143444410785353,0,0,0,1.9307228228694,0,0,0.977931553462932,1.62758471326295,0,0,1.28227396921293 | ||
|short_description=p13@XIST | |short_description=p13@XIST | ||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p13@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 285bp_to_ENST00000433732_5end |
EntrezGene: | NA |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.50e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-07 | 42 |
defensive cell | 5.42e-07 | 48 |
phagocyte | 5.42e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.60e-08 | 41 |
forebrain | 1.60e-08 | 41 |
anterior neural tube | 1.60e-08 | 41 |
future forebrain | 1.60e-08 | 41 |
neural tube | 2.92e-08 | 56 |
neural rod | 2.92e-08 | 56 |
future spinal cord | 2.92e-08 | 56 |
neural keel | 2.92e-08 | 56 |
regional part of nervous system | 6.96e-08 | 53 |
regional part of brain | 6.96e-08 | 53 |