FFCP PHASE1:Hg19::chr11:122930121..122930134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30352 | |HGNC=30352 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000365382_5end | |association_with_transcript=0bp_to_ENST00000365382_5end | ||
|cluster_id=chr11:122930121..122930134,- | |||
|description=CAGE_peak_1_at_SNORD14C_5end | |description=CAGE_peak_1_at_SNORD14C_5end | ||
|id=chr11:122930121..122930134,- | |id=chr11:122930121..122930134,- | ||
|ontology_enrichment_celltype=CL:0000359!3.28e-07!32 | |ontology_enrichment_celltype=CL:0000359!3.28e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.61e-11;32!CL:0000192;4.88e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;8.61e-11;32!CL:0000192;4.88e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.54e-12,32;CL:0000192,5.55e-09,43;CL:0000514,5.55e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-07;43 | |ontology_enrichment_development_v019=CL:0000514;4.88e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.43e-11!42;UBERON:0003509!8.43e-11!42;UBERON:0004572!8.43e-11!42;UBERON:0004573!3.54e-09!33;UBERON:0004571!3.54e-09!33 | |ontology_enrichment_uberon=UBERON:0001637!8.43e-11!42;UBERON:0003509!8.43e-11!42;UBERON:0004572!8.43e-11!42;UBERON:0004573!3.54e-09!33;UBERON:0004571!3.54e-09!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.03e-11;42!UBERON:0003509;2.03e-11;42!UBERON:0004572;2.03e-11;42!UBERON:0004573;2.92e-10;33!UBERON:0004571;2.92e-10;33!UBERON:0007500;2.66e-07;56!UBERON:0001981;2.66e-07;56!UBERON:0004537;2.66e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001637;2.03e-11;42!UBERON:0003509;2.03e-11;42!UBERON:0004572;2.03e-11;42!UBERON:0004573;2.92e-10;33!UBERON:0004571;2.92e-10;33!UBERON:0007500;2.66e-07;56!UBERON:0001981;2.66e-07;56!UBERON:0004537;2.66e-07;56 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.08e-15,42;UBERON:0003509,1.08e-15,42;UBERON:0004572,1.08e-15,42;UBERON:0004573,4.03e-12,33;UBERON:0004571,4.03e-12,33;UBERON:0007500,8.49e-12,59;UBERON:0001981,8.49e-12,59;UBERON:0004537,8.49e-12,59;UBERON:0006965,8.49e-12,59;UBERON:0004872,2.04e-10,83;UBERON:0000055,3.42e-10,68;UBERON:0003914,1.60e-08,117;UBERON:0001009,4.93e-08,112;UBERON:0004535,1.49e-07,109;UBERON:0007524,2.89e-07,73;UBERON:0002329,3.44e-07,71;UBERON:0003059,3.44e-07,71;UBERON:0007282,3.44e-07,71;UBERON:0004290,3.44e-07,71;UBERON:0009618,3.44e-07,71;UBERON:0001134,3.62e-07,62;UBERON:0002036,3.62e-07,62;UBERON:0003082,3.62e-07,62;UBERON:0003077,5.92e-07,72;UBERON:0007285,5.92e-07,72;UBERON:0002049,7.40e-07,78;UBERON:0007798,7.40e-07,78 | |||
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| ||
|short_description=p1@SNORD14C | |short_description=p1@SNORD14C | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p1@SNORD14C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD14C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000365382_5end |
EntrezGene: | NA |
HGNC: | 30352 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.54e-12 | 32 |
smooth muscle cell | 5.55e-09 | 43 |
smooth muscle myoblast | 5.55e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 1.08e-15 | 42 |
arterial blood vessel | 1.08e-15 | 42 |
arterial system | 1.08e-15 | 42 |
systemic artery | 4.03e-12 | 33 |
systemic arterial system | 4.03e-12 | 33 |
epithelial tube open at both ends | 8.49e-12 | 59 |
blood vessel | 8.49e-12 | 59 |
blood vasculature | 8.49e-12 | 59 |
vascular cord | 8.49e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 2.04e-10 | 83 |
vessel | 3.42e-10 | 68 |
epithelial tube | 1.60e-08 | 117 |
circulatory system | 4.93e-08 | 112 |
cardiovascular system | 1.49e-07 | 109 |
dense mesenchyme tissue | 2.89e-07 | 73 |
somite | 3.44e-07 | 71 |
presomitic mesoderm | 3.44e-07 | 71 |
presumptive segmental plate | 3.44e-07 | 71 |
dermomyotome | 3.44e-07 | 71 |
trunk paraxial mesoderm | 3.44e-07 | 71 |
skeletal muscle tissue | 3.62e-07 | 62 |
striated muscle tissue | 3.62e-07 | 62 |
myotome | 3.62e-07 | 62 |
paraxial mesoderm | 5.92e-07 | 72 |
presumptive paraxial mesoderm | 5.92e-07 | 72 |
vasculature | 7.40e-07 | 78 |
vascular system | 7.40e-07 | 78 |