FFCP PHASE1:Hg19::chr4:15704679..15704733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=683 | |EntrezGene=683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1118 | |HGNC=1118 | ||
|TSSclassifier=strong | |||
|UniProt=A6NC48 | |UniProt=A6NC48 | ||
|association_with_transcript=0bp_to_ENST00000382346_5end | |association_with_transcript=0bp_to_ENST00000382346_5end | ||
|cluster_id=chr4:15704679..15704733,+ | |||
|coexpression_cluster_id=C4382 | |coexpression_cluster_id=C4382 | ||
|description=CAGE_peak_1_at_BST1_5end | |description=CAGE_peak_1_at_BST1_5end | ||
|id=chr4:15704679..15704733,+ | |id=chr4:15704679..15704733,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.68e-16;33!CL:0002057;3.68e-16;33!CL:0000473;4.61e-16;39!CL:0000234;4.61e-16;39!CL:0000576;1.06e-15;48!CL:0000766;8.44e-14;69!CL:0000094;5.96e-07;8!CL:0000763;6.72e-07;100 | |ontology_enrichment_celltype=CL:0000766!6.72e-26!76;CL:0000048!1.37e-25!430;CL:0000723!5.36e-24!436;CL:0000034!1.05e-23!444;CL:0002194!4.86e-21!63;CL:0000576!4.86e-21!63;CL:0000040!4.86e-21!63;CL:0000559!4.86e-21!63;CL:0002057!1.78e-20!42;CL:0000557!1.33e-19!71;CL:0000839!1.34e-19!70;CL:0002009!1.43e-19!65;CL:0002371!2.97e-19!591;CL:0000144!4.59e-17!625;CL:0000860!5.01e-17!45;CL:0000134!5.27e-15!358;CL:0002320!5.37e-15!365;CL:0000763!8.75e-14!112;CL:0000049!8.75e-14!112;CL:0000219!4.23e-13!390;CL:0000055!8.07e-11!180;CL:0000222!1.28e-10!119;CL:0000183!9.79e-08!59;CL:0000192!2.48e-07!42;CL:0000514!2.48e-07!42;CL:0000057!3.14e-07!75;CL:0000680!3.25e-07!57;CL:0000056!3.25e-07!57;CL:0000355!3.25e-07!57;CL:0000187!3.30e-07!54 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.68e-16;33!CL:0002057;3.68e-16;33!CL:0000473;4.61e-16;39!CL:0000234;4.61e-16;39!CL:0000576;1.06e-15;48!CL:0000766;8.44e-14;69!CL:0000094;5.96e-07;8!CL:0000763;6.72e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.69e-30,72;CL:0000048,8.81e-29,427;CL:0000723,6.27e-27,433;CL:0000034,4.06e-26,441;CL:0002194,1.04e-24,59;CL:0000576,1.04e-24,59;CL:0000040,1.04e-24,59;CL:0000559,1.04e-24,59;CL:0000473,2.61e-24,48;CL:0000234,2.61e-24,48;CL:0002009,8.53e-23,61;CL:0000557,1.14e-22,67;CL:0000839,1.16e-22,66;CL:0000860,2.10e-21,42;CL:0002057,2.10e-21,42;CL:0000134,9.16e-18,354;CL:0002320,9.60e-18,361;CL:0000763,6.86e-16,108;CL:0000049,6.86e-16,108;CL:0000219,9.76e-16,386;CL:0000222,2.40e-11,121;CL:0000192,1.11e-07,43;CL:0000514,1.11e-07,43;CL:0000057,1.65e-07,76;CL:0000680,2.23e-07,58;CL:0000056,2.23e-07,58;CL:0000355,2.23e-07,58;CL:0000187,2.30e-07,55;CL:0000094,6.06e-07,8;CL:0000359,7.00e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;6.40e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.24e-35!216;UBERON:0002204!2.12e-22!167;UBERON:0002193!1.92e-20!112;UBERON:0002390!3.40e-18!102;UBERON:0003061!3.40e-18!102;UBERON:0004535!2.25e-17!110;UBERON:0002371!2.79e-17!80;UBERON:0001009!5.76e-17!113;UBERON:0001474!6.73e-15!86;UBERON:0002384!8.37e-15!375;UBERON:0004765!3.38e-14!101;UBERON:0001434!3.38e-14!101;UBERON:0002405!8.73e-14!115;UBERON:0002049!6.31e-13!79;UBERON:0007798!6.31e-13!79;UBERON:0000926!8.59e-12!448;UBERON:0004120!8.59e-12!448;UBERON:0006603!8.59e-12!448;UBERON:0004872!3.30e-11!84;UBERON:0000055!6.96e-11!69;UBERON:0001981!2.96e-09!60;UBERON:0007500!2.96e-09!60;UBERON:0004537!2.96e-09!60;UBERON:0006965!2.96e-09!60;UBERON:0001637!1.81e-07!42;UBERON:0003509!1.81e-07!42;UBERON:0004572!1.81e-07!42;UBERON:0003914!2.70e-07!118;UBERON:0000468!3.60e-07!659;UBERON:0002385!6.71e-07!63;UBERON:0001015!6.71e-07!63;UBERON:0000383!6.71e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.22e-37,203;UBERON:0000926,1.17e-34,315;UBERON:0004120,1.17e-34,315;UBERON:0006603,1.17e-34,315;UBERON:0002204,6.29e-24,167;UBERON:0002193,7.04e-24,108;UBERON:0002390,1.77e-21,98;UBERON:0003061,1.77e-21,98;UBERON:0002405,3.93e-20,93;UBERON:0002371,4.23e-20,76;UBERON:0004535,1.98e-17,109;UBERON:0002384,2.08e-17,371;UBERON:0001474,3.02e-17,82;UBERON:0001009,1.60e-16,112;UBERON:0001434,1.23e-15,100;UBERON:0004765,1.32e-15,90;UBERON:0002049,1.70e-12,78;UBERON:0007798,1.70e-12,78;UBERON:0004872,4.71e-11,83;UBERON:0000055,1.11e-10,68;UBERON:0007500,6.69e-09,59;UBERON:0001981,6.69e-09,59;UBERON:0004537,6.69e-09,59;UBERON:0006965,6.69e-09,59;UBERON:0003914,6.07e-08,117;UBERON:0001637,9.28e-08,42;UBERON:0003509,9.28e-08,42;UBERON:0004572,9.28e-08,42;UBERON:0002385,6.52e-07,64;UBERON:0001015,6.52e-07,64;UBERON:0000383,6.52e-07,64;UBERON:0000479,9.07e-07,773 | |||
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|phase1_expression=30.5219677174535,17.7703434829516,39.326278742776,14.0102617694383,22.3480547213644,102.063607319743,7.59899634504932,3.15859936713415,4.17897005119742,5.89761447603621,4.88460817580699,8.51921351307672,10.0231451726812,2.72285976512103,2.31978163009541,12.7741777825837,9.64311244838363,11.684961446198,18.5414463540393,16.4982217822896,14.2800483870977,5.64218498660558,15.4567433050771,13.1399448069969,11.5499228427219,0,0,0,55.0709987588466,26.1003990706105,46.909285364771,0.919421224478927,0.30120591877825,0,0,0,20.8456311927742,47.0896097252096,24.4664225913573,32.9856523488095,15.8979986710346,14.2513213048351,18.5454408696614,19.3379657576821,17.0044174659964,13.0995393041421,23.2429036905685,22.6142338412004,23.2279778171328,33.3723175093695,32.2762490226667,35.2358522533992,29.3033828626126,23.2374486090177,24.3767675869815,24.0950194614534,16.1014628534129,18.8767726933871,18.6711174346251,25.9952511931636,17.2621023965741,20.1209293113897,27.3265210941636,21.3112375266347,25.5384129993154,19.8584828641899,11.2108004819203,33.4160724791469,38.5897359630949,32.5783267057675,25.4267791106015,27.2525450630798,25.9499157701525,14.576614755524,19.9848041967141,36.0612870274407,59.4218458764959,61.5725260650176,71.2014349068065,12.2555479808737,10.1447505371536,17.3530946076402,0,0.546138611262131,0,6.40095333849761,1.20118796110804,0,1.98313461835459,0.954053754535364,0,0,0.382273228125229,5.28685314316103,7.8471198817415,11.8522838148785,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0.95569624297229,0,0,3.61380285786655,1.27986611154418,1.24930726552346,3.07810427657222,1.64225599384209,0,0,0,4.87613732627923,11.4019146149618,18.0286212199378,12.2889311810753,18.048164782892,14.1949588581607,4.7717156823066,10.2193322763554,13.5184788544617,11.3081992705908,10.6280090688683,3.20898734969396,1.45718115317017,3.33705998505986,1.9472843619281,1.91542711029194,4.78648657867915,10.9705687180457,10.8679033048224,4.82894751728434,2.18638648103376,4.30117297553062,6.59566953054429,3.39184765154406,15.9409785759764,4.67700671298115,5.43386912995707,6.46041897923322,8.89415656716776,20.4179573786449,24.9754176607671,28.8903400173035,25.3824539850096,8.82391392830085,10.5318453224629,3.48268940307911,3.36794058939255,3.26573293401634,1.53316637465883,0.949265659568129,3.48083313467774,67.2080128923923,124.089684527464,2.61656431285521,76.5336805610791,33.8103466144428,19.7289679411696,37.8624339388434,14.5414036701326,23.5484592059769,9.60740961567345,10.853372130355,4.04574346019696,4.31074150623002,2.61539044981534,12.1085942115945,7.49028701823999,2.10889288650417,1.24864030732128,1.71141546463335,1.49448680551801,0.704606991862589,0.323745888736263,0.702254033511242,1.22492502752936,0.982674538494144,2.9964476540972,14.2560342873846,12.857880322485,6.37112953356618,12.9351265526923,1.17835279767846,1.87677779807946,1.10825646193673,4.38977620880838,11.0335606487647,15.0238058906597,10.4357608507219,11.3015470483983,27.5489031575952,13.7755735753715,10.2030972668697,10.8205155700361,9.27505944164265,14.7032316501956,3.88185564154912,2.24105111870757,6.56327813034698,17.4894807420369,18.912588647801,19.1705179958972,8.96693674225998,9.83451435400828,0.386521706326594,0.818238361772504,0.860413786167011,0.487894824518382,1.19276791489337,0.464775771478074,0.621966330092223,0.252320850875628,0,3.12899064659632,8.36213219650751,5.52539685409922,10.6804623447355,10.8281922250438,0,0,0,0,0,0,0.134831308160164,0,0,14.0249536378683,7.01208869017229,24.694440679884,17.641045366265,0,0,3.54473944008842,0,0,8.40682270462775,0.109750285408626,1.1240175325762,0.402115889646523,0.370353780634118,0.977424915930974,1.03993478527958,14.4331342025273,21.4471249203892,16.7894432757225,35.3697797014631,50.4654208708506,33.8652390977585,0,0,38.409852949634,14.742268703772,31.0639129183442,1.87467667973554,1.84780341018745,0.425325291727159,0.0895585227028483,0,0.766765358330422,5.41929561685538,6.16339038092582,4.56121854189699,8.64719720501769,6.18587923789262,1.96843472305724,8.02175693672383,9.37739577680376,10.2643467613623,7.30075198193597,7.80891950394185,4.85904935471983,6.72786506072164,10.899001720832,4.1069440059732,10.8588241236533,14.3062578340753,4.22651376278,15.9562869950922,22.8816361205005,0.257207374262142,0,0,11.8671734736262,5.96883765930587,6.58592269424615,1.95441710576241,12.7941101547316,0.791951872933429,23.8137107877073,50.5489405988171,43.3882781730128,21.8922805154143,18.5835123829887,21.0833939483032,19.1699884393266,19.5265290917994,8.5582143024431,6.37037749337349,3.28762116080613,4.47652408099739,0,0.788123040807709,0,2.18183161675572,3.04913549066956,1.30139853857622,2.31986643833309,3.18280904135263,5.10351001322531,62.1675829876161,56.8406772487647,104.018293872445,1.59498939234882,7.50255781589516,2.17012018959788,11.6463682457252,9.09987842865525,19.5550994642079,9.13703036943163,1.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| ||
|short_description=p1@BST1 | |short_description=p1@BST1 | ||
}} | }} |
Latest revision as of 08:49, 16 September 2015
Short description: | p1@BST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BST1_5end |
Coexpression cluster: | C4382_basal_hepatic_Eosinophils_Adipocyte_Preadipocyte_Neutrophils_Ewing |
Association with transcript: | 0bp_to_ENST00000382346_5end |
EntrezGene: | BST1 |
HGNC: | 1118 |
UniProt: | A6NC48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.69e-30 | 72 |
multi fate stem cell | 8.81e-29 | 427 |
somatic stem cell | 6.27e-27 | 433 |
stem cell | 4.06e-26 | 441 |
monopoietic cell | 1.04e-24 | 59 |
monocyte | 1.04e-24 | 59 |
monoblast | 1.04e-24 | 59 |
promonocyte | 1.04e-24 | 59 |
defensive cell | 2.61e-24 | 48 |
phagocyte | 2.61e-24 | 48 |
macrophage dendritic cell progenitor | 8.53e-23 | 61 |
granulocyte monocyte progenitor cell | 1.14e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.16e-22 | 66 |
classical monocyte | 2.10e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-21 | 42 |
mesenchymal cell | 9.16e-18 | 354 |
connective tissue cell | 9.60e-18 | 361 |
myeloid cell | 6.86e-16 | 108 |
common myeloid progenitor | 6.86e-16 | 108 |
motile cell | 9.76e-16 | 386 |
mesodermal cell | 2.40e-11 | 121 |
smooth muscle cell | 1.11e-07 | 43 |
smooth muscle myoblast | 1.11e-07 | 43 |
fibroblast | 1.65e-07 | 76 |
muscle precursor cell | 2.23e-07 | 58 |
myoblast | 2.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-07 | 58 |
muscle cell | 2.30e-07 | 55 |
granulocyte | 6.06e-07 | 8 |
vascular associated smooth muscle cell | 7.00e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.22e-37 | 203 |
mesoderm | 1.17e-34 | 315 |
mesoderm-derived structure | 1.17e-34 | 315 |
presumptive mesoderm | 1.17e-34 | 315 |
musculoskeletal system | 6.29e-24 | 167 |
hemolymphoid system | 7.04e-24 | 108 |
hematopoietic system | 1.77e-21 | 98 |
blood island | 1.77e-21 | 98 |
immune system | 3.93e-20 | 93 |
bone marrow | 4.23e-20 | 76 |
cardiovascular system | 1.98e-17 | 109 |
connective tissue | 2.08e-17 | 371 |
bone element | 3.02e-17 | 82 |
circulatory system | 1.60e-16 | 112 |
skeletal system | 1.23e-15 | 100 |
skeletal element | 1.32e-15 | 90 |
vasculature | 1.70e-12 | 78 |
vascular system | 1.70e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 4.71e-11 | 83 |
vessel | 1.11e-10 | 68 |
epithelial tube open at both ends | 6.69e-09 | 59 |
blood vessel | 6.69e-09 | 59 |
blood vasculature | 6.69e-09 | 59 |
vascular cord | 6.69e-09 | 59 |
epithelial tube | 6.07e-08 | 117 |
artery | 9.28e-08 | 42 |
arterial blood vessel | 9.28e-08 | 42 |
arterial system | 9.28e-08 | 42 |
muscle tissue | 6.52e-07 | 64 |
musculature | 6.52e-07 | 64 |
musculature of body | 6.52e-07 | 64 |
tissue | 9.07e-07 | 773 |