FFCP PHASE1:Hg19::chr4:15683438..15683482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285550 | |EntrezGene=285550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27740 | |HGNC=27740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503600,ENST00000508567,ENST00000514803_5end | |association_with_transcript=0bp_to_ENST00000503600,ENST00000508567,ENST00000514803_5end | ||
|cluster_id=chr4:15683438..15683482,+ | |||
|description=CAGE_peak_1_at_FAM200B_5end | |description=CAGE_peak_1_at_FAM200B_5end | ||
|id=chr4:15683438..15683482,+ | |id=chr4:15683438..15683482,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.50e-15!246;CL:0002321!6.19e-15!248;CL:0000222!6.06e-11!119;CL:0000055!3.20e-09!180 | |ontology_enrichment_celltype=CL:0000220!1.50e-15!246;CL:0002321!6.19e-15!248;CL:0000222!6.06e-11!119;CL:0000055!3.20e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.05e-15,250;CL:0000222,5.54e-11,121;CL:0000213,5.33e-07,58;CL:0000215,5.33e-07,58;CL:0000221,8.40e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.46e-16!659;UBERON:0000467!7.85e-15!625;UBERON:0000480!1.95e-14!626;UBERON:0000923!8.87e-13!604;UBERON:0005291!8.87e-13!604;UBERON:0006598!8.87e-13!604;UBERON:0002532!8.87e-13!604;UBERON:0002050!9.33e-13!605;UBERON:0005423!9.33e-13!605;UBERON:0000922!2.63e-12!612;UBERON:0000475!2.80e-10!365;UBERON:0000119!6.34e-10!312;UBERON:0000483!2.01e-09!309;UBERON:0000477!8.26e-09!286;UBERON:0004111!9.09e-09!241;UBERON:0000481!2.03e-08!347;UBERON:0000025!3.44e-08!194;UBERON:0000062!3.74e-08!511;UBERON:0003056!4.30e-08!61;UBERON:0000073!2.44e-07!94;UBERON:0001016!2.44e-07!94;UBERON:0005743!3.57e-07!86;UBERON:0003075!3.74e-07!86;UBERON:0007284!3.74e-07!86;UBERON:0000019!9.46e-07!19;UBERON:0000047!9.46e-07!19;UBERON:0004088!9.46e-07!19;UBERON:0003072!9.46e-07!19;UBERON:0003071!9.46e-07!19;UBERON:0004128!9.46e-07!19 | |ontology_enrichment_uberon=UBERON:0000468!6.46e-16!659;UBERON:0000467!7.85e-15!625;UBERON:0000480!1.95e-14!626;UBERON:0000923!8.87e-13!604;UBERON:0005291!8.87e-13!604;UBERON:0006598!8.87e-13!604;UBERON:0002532!8.87e-13!604;UBERON:0002050!9.33e-13!605;UBERON:0005423!9.33e-13!605;UBERON:0000922!2.63e-12!612;UBERON:0000475!2.80e-10!365;UBERON:0000119!6.34e-10!312;UBERON:0000483!2.01e-09!309;UBERON:0000477!8.26e-09!286;UBERON:0004111!9.09e-09!241;UBERON:0000481!2.03e-08!347;UBERON:0000025!3.44e-08!194;UBERON:0000062!3.74e-08!511;UBERON:0003056!4.30e-08!61;UBERON:0000073!2.44e-07!94;UBERON:0001016!2.44e-07!94;UBERON:0005743!3.57e-07!86;UBERON:0003075!3.74e-07!86;UBERON:0007284!3.74e-07!86;UBERON:0000019!9.46e-07!19;UBERON:0000047!9.46e-07!19;UBERON:0004088!9.46e-07!19;UBERON:0003072!9.46e-07!19;UBERON:0003071!9.46e-07!19;UBERON:0004128!9.46e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000019;9.35e-07;19!UBERON:0000047;9.35e-07;19!UBERON:0004088;9.35e-07;19!UBERON:0010230;9.35e-07;19!UBERON:0000970;9.94e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.30e-11,592;UBERON:0005423,1.96e-11,581;UBERON:0002050,2.83e-10,564;UBERON:0000119,4.50e-10,309;UBERON:0000483,1.45e-09,306;UBERON:0000923,2.04e-09,560;UBERON:0010316,2.04e-09,560;UBERON:0005291,2.04e-09,560;UBERON:0006598,2.04e-09,560;UBERON:0010317,2.04e-09,560;UBERON:0002532,2.04e-09,560;UBERON:0004111,1.08e-08,240;UBERON:0000025,3.61e-08,192;UBERON:0003056,8.23e-08,61;UBERON:0003075,2.59e-07,82;UBERON:0007284,2.59e-07,82 | |||
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| ||
|short_description=p1@FAM200B | |short_description=p1@FAM200B | ||
}} | }} |
Latest revision as of 08:43, 16 September 2015
Short description: | p1@FAM200B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM200B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503600, ENST00000508567, ENST00000514803_5end |
EntrezGene: | FAM200B |
HGNC: | 27740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.05e-15 | 250 |
mesodermal cell | 5.54e-11 | 121 |
lining cell | 5.33e-07 | 58 |
barrier cell | 5.33e-07 | 58 |
ectodermal cell | 8.40e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.30e-11 | 592 |
developing anatomical structure | 1.96e-11 | 581 |
embryonic structure | 2.83e-10 | 564 |
cell layer | 4.50e-10 | 309 |
epithelium | 1.45e-09 | 306 |
germ layer | 2.04e-09 | 560 |
germ layer / neural crest | 2.04e-09 | 560 |
embryonic tissue | 2.04e-09 | 560 |
presumptive structure | 2.04e-09 | 560 |
germ layer / neural crest derived structure | 2.04e-09 | 560 |
epiblast (generic) | 2.04e-09 | 560 |
anatomical conduit | 1.08e-08 | 240 |
tube | 3.61e-08 | 192 |
pre-chordal neural plate | 8.23e-08 | 61 |
neural plate | 2.59e-07 | 82 |
presumptive neural plate | 2.59e-07 | 82 |