FFCP PHASE1:Hg19::chr14:81687672..81687692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2957 | |EntrezGene=2957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4646 | |HGNC=4646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000556268,uc001xvh.1_5end | |association_with_transcript=28bp_to_ENST00000556268,uc001xvh.1_5end | ||
|cluster_id=chr14:81687672..81687692,- | |||
|description=CAGE_peak_7_at_GTF2A1_5end | |description=CAGE_peak_7_at_GTF2A1_5end | ||
|id=chr14:81687672..81687692,- | |id=chr14:81687672..81687692,- | ||
|ontology_enrichment_celltype=CL:0002057!3.17e-19!42;CL:0000860!2.16e-18!45;CL:0000766!1.24e-14!76;CL:0000037!2.72e-14!172;CL:0000566!2.72e-14!172;CL:0000738!3.04e-14!140;CL:0002194!7.08e-14!63;CL:0000576!7.08e-14!63;CL:0000040!7.08e-14!63;CL:0000559!7.08e-14!63;CL:0000839!1.45e-13!70;CL:0002009!1.55e-13!65;CL:0000557!3.27e-13!71;CL:0000763!7.14e-13!112;CL:0000049!7.14e-13!112;CL:0000988!7.71e-13!182;CL:0002087!7.77e-13!119;CL:0002032!8.09e-13!165;CL:0000837!8.09e-13!165;CL:0002031!4.51e-12!124 | |ontology_enrichment_celltype=CL:0002057!3.17e-19!42;CL:0000860!2.16e-18!45;CL:0000766!1.24e-14!76;CL:0000037!2.72e-14!172;CL:0000566!2.72e-14!172;CL:0000738!3.04e-14!140;CL:0002194!7.08e-14!63;CL:0000576!7.08e-14!63;CL:0000040!7.08e-14!63;CL:0000559!7.08e-14!63;CL:0000839!1.45e-13!70;CL:0002009!1.55e-13!65;CL:0000557!3.27e-13!71;CL:0000763!7.14e-13!112;CL:0000049!7.14e-13!112;CL:0000988!7.71e-13!182;CL:0002087!7.77e-13!119;CL:0002032!8.09e-13!165;CL:0000837!8.09e-13!165;CL:0002031!4.51e-12!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.27e-34;33!CL:0002057;9.27e-34;33!CL:0000473;1.31e-22;39!CL:0000234;1.31e-22;39!CL:0000576;3.55e-17;48!CL:0000766;9.68e-13;69!CL:0002087;3.67e-08;104!CL:0000763;1.23e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-34,42;CL:0002057,1.05e-34,42;CL:0000473,7.22e-29,48;CL:0000234,7.22e-29,48;CL:0000738,1.01e-24,136;CL:0000766,2.20e-24,72;CL:0000037,2.63e-23,168;CL:0000988,5.90e-22,177;CL:0002009,5.16e-21,61;CL:0002032,7.12e-21,161;CL:0000837,7.12e-21,161;CL:0002194,8.81e-21,59;CL:0000576,8.81e-21,59;CL:0000040,8.81e-21,59;CL:0000559,8.81e-21,59;CL:0000557,1.55e-20,67;CL:0000763,3.61e-20,108;CL:0000049,3.61e-20,108;CL:0002087,4.38e-20,115;CL:0000839,1.15e-19,66;CL:0002031,4.09e-19,120;CL:0000134,2.63e-10,354;CL:0000219,4.60e-10,386;CL:0002320,1.12e-09,361;CL:0000094,8.92e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.60e-07,4;DOID:1612,3.60e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.58e-12!86;UBERON:0002371!1.88e-11!80;UBERON:0002390!3.03e-10!102;UBERON:0003061!3.03e-10!102;UBERON:0004765!8.22e-09!101;UBERON:0001434!8.22e-09!101;UBERON:0002193!4.62e-08!112;UBERON:0002405!8.71e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.67e-19,82;UBERON:0002371,5.39e-19,76;UBERON:0004765,2.33e-16,90;UBERON:0002390,5.72e-16,98;UBERON:0003061,5.72e-16,98;UBERON:0002405,2.46e-15,93;UBERON:0001434,2.90e-15,100;UBERON:0002193,2.44e-13,108;UBERON:0002384,3.55e-10,371 | |||
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| ||
|short_description=p7@GTF2A1 | |short_description=p7@GTF2A1 | ||
}} | }} |
Latest revision as of 08:24, 16 September 2015
Short description: | p7@GTF2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GTF2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000556268, uc001xvh.1_5end |
EntrezGene: | GTF2A1 |
HGNC: | 4646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-34 | 42 |
defensive cell | 7.22e-29 | 48 |
phagocyte | 7.22e-29 | 48 |
leukocyte | 1.01e-24 | 136 |
myeloid leukocyte | 2.20e-24 | 72 |
hematopoietic stem cell | 2.63e-23 | 168 |
hematopoietic cell | 5.90e-22 | 177 |
macrophage dendritic cell progenitor | 5.16e-21 | 61 |
hematopoietic oligopotent progenitor cell | 7.12e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.12e-21 | 161 |
monopoietic cell | 8.81e-21 | 59 |
monocyte | 8.81e-21 | 59 |
monoblast | 8.81e-21 | 59 |
promonocyte | 8.81e-21 | 59 |
granulocyte monocyte progenitor cell | 1.55e-20 | 67 |
myeloid cell | 3.61e-20 | 108 |
common myeloid progenitor | 3.61e-20 | 108 |
nongranular leukocyte | 4.38e-20 | 115 |
myeloid lineage restricted progenitor cell | 1.15e-19 | 66 |
hematopoietic lineage restricted progenitor cell | 4.09e-19 | 120 |
mesenchymal cell | 2.63e-10 | 354 |
motile cell | 4.60e-10 | 386 |
connective tissue cell | 1.12e-09 | 361 |
granulocyte | 8.92e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.67e-19 | 82 |
bone marrow | 5.39e-19 | 76 |
skeletal element | 2.33e-16 | 90 |
hematopoietic system | 5.72e-16 | 98 |
blood island | 5.72e-16 | 98 |
immune system | 2.46e-15 | 93 |
skeletal system | 2.90e-15 | 100 |
hemolymphoid system | 2.44e-13 | 108 |
connective tissue | 3.55e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.60e-07 | 4 |
breast cancer | 3.60e-07 | 4 |