FFCP PHASE1:Hg19::chr17:54991812..54991826,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:54991812..54991826,-
|short_description=p3@TRIM25
|description=CAGE_peak_3_at_TRIM25_5end
|association_with_transcript=-403bp_to_ENST00000316881,NM_005082...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7706 | |EntrezGene=7706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12932 | |HGNC=12932 | ||
|TSSclassifier=strong | |||
|UniProt=Q14258 | |UniProt=Q14258 | ||
|association_with_transcript=-403bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | |||
|cluster_id=chr17:54991812..54991826,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_TRIM25_5end | |||
|id=chr17:54991812..54991826,- | |||
|ontology_enrichment_celltype=CL:0002057!3.57e-40!42;CL:0000766!1.42e-38!76;CL:0000860!1.77e-36!45;CL:0000763!2.69e-34!112;CL:0000049!2.69e-34!112;CL:0000557!4.70e-33!71;CL:0000839!9.03e-29!70;CL:0000738!2.13e-27!140;CL:0002009!2.23e-27!65;CL:0000037!5.00e-27!172;CL:0000566!5.00e-27!172;CL:0002032!3.73e-26!165;CL:0000837!3.73e-26!165;CL:0000988!1.22e-25!182;CL:0002194!1.77e-25!63;CL:0000576!1.77e-25!63;CL:0000040!1.77e-25!63;CL:0000559!1.77e-25!63;CL:0002031!1.26e-20!124;CL:0002087!4.42e-18!119;CL:0000094!7.83e-11!8;CL:0000134!2.92e-09!358;CL:0002320!1.32e-08!365;CL:0000081!2.74e-07!11;CL:0000219!9.88e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-74;33!CL:0002057;7.09e-74;33!CL:0000473;8.01e-51;39!CL:0000234;8.01e-51;39!CL:0000576;3.61e-42;48!CL:0000766;1.85e-33;69!CL:0000094;6.87e-20;8!CL:0000763;1.43e-18;100!CL:0000081;3.55e-14;11!CL:0000775;1.70e-11;3!CL:0002087;1.79e-10;104!CL:0000738;1.81e-10;136!CL:0000097;5.95e-10;5!CL:0000771;7.19e-08;2!CL:0001014;5.85e-07;2!CL:0001016;5.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-76,42;CL:0002057,1.21e-76,42;CL:0000766,2.18e-76,72;CL:0000557,2.21e-66,67;CL:0000473,5.71e-66,48;CL:0000234,5.71e-66,48;CL:0000763,1.72e-60,108;CL:0000049,1.72e-60,108;CL:0000839,3.16e-57,66;CL:0002009,1.25e-55,61;CL:0002194,4.95e-51,59;CL:0000576,4.95e-51,59;CL:0000040,4.95e-51,59;CL:0000559,4.95e-51,59;CL:0000738,1.56e-41,136;CL:0002032,5.98e-37,161;CL:0000837,5.98e-37,161;CL:0000037,1.17e-36,168;CL:0000988,3.23e-34,177;CL:0002031,4.72e-31,120;CL:0002087,7.65e-24,115;CL:0000094,9.16e-20,8;CL:0000081,4.36e-14,11;CL:0000134,8.37e-14,354;CL:0002320,2.63e-13,361;CL:0000219,1.47e-11,386;CL:0000775,1.76e-11,3;CL:0000097,4.76e-10,5;CL:0002028,4.76e-10,5;CL:0000048,1.97e-09,427;CL:0000034,2.15e-09,441;CL:0000723,3.86e-09,433;CL:0000771,7.19e-08,2;CL:0001014,4.54e-07,2;CL:0001016,4.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.19e-56;42!CL:0000049;1.71e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-43!102;UBERON:0003061!2.22e-43!102;UBERON:0002193!3.38e-41!112;UBERON:0002371!1.06e-28!80;UBERON:0001474!1.26e-26!86;UBERON:0002405!1.91e-22!115;UBERON:0004765!5.28e-22!101;UBERON:0001434!5.28e-22!101;UBERON:0000178!2.46e-14!15;UBERON:0000179!2.46e-14!15;UBERON:0000463!2.46e-14!15;UBERON:0003081!1.11e-12!216;UBERON:0002204!2.01e-09!167;UBERON:0002384!1.73e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.37e-19;15!UBERON:0000179;2.37e-19;15!UBERON:0000463;2.37e-19;15!UBERON:0002390;3.11e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-70,98;UBERON:0003061,2.39e-70,98;UBERON:0002193,7.78e-63,108;UBERON:0002371,1.92e-57,76;UBERON:0001474,1.46e-52,82;UBERON:0004765,4.66e-47,90;UBERON:0002405,3.10e-45,93;UBERON:0001434,2.10e-41,100;UBERON:0003081,3.46e-28,203;UBERON:0002204,6.12e-21,167;UBERON:0000178,2.35e-19,15;UBERON:0000179,2.35e-19,15;UBERON:0000463,2.35e-19,15;UBERON:0000926,3.99e-14,315;UBERON:0004120,3.99e-14,315;UBERON:0006603,3.99e-14,315;UBERON:0002384,1.25e-12,371 | |||
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| ||
|short_description=p3@TRIM25 | |||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p3@TRIM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM25_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -403bp_to_ENST00000316881, NM_005082, uc002iut.2, uc010dcj.2_5end |
EntrezGene: | TRIM25 |
HGNC: | 12932 |
UniProt: | Q14258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-70 | 98 |
blood island | 2.39e-70 | 98 |
hemolymphoid system | 7.78e-63 | 108 |
bone marrow | 1.92e-57 | 76 |
bone element | 1.46e-52 | 82 |
skeletal element | 4.66e-47 | 90 |
immune system | 3.10e-45 | 93 |
skeletal system | 2.10e-41 | 100 |
lateral plate mesoderm | 3.46e-28 | 203 |
musculoskeletal system | 6.12e-21 | 167 |
blood | 2.35e-19 | 15 |
haemolymphatic fluid | 2.35e-19 | 15 |
organism substance | 2.35e-19 | 15 |
mesoderm | 3.99e-14 | 315 |
mesoderm-derived structure | 3.99e-14 | 315 |
presumptive mesoderm | 3.99e-14 | 315 |
connective tissue | 1.25e-12 | 371 |