FFCP PHASE1:Hg19::chr20:43160458..43160598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11142 | |EntrezGene=11142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9019 | |HGNC=9019 | ||
|TSSclassifier=strong | |||
|UniProt=Q5H937,Q9Y2B9 | |UniProt=Q5H937,Q9Y2B9 | ||
|association_with_transcript=0bp_to_ENST00000372882,ENST00000372887,ENST00000372889_5end | |association_with_transcript=0bp_to_ENST00000372882,ENST00000372887,ENST00000372889_5end | ||
|cluster_id=chr20:43160458..43160598,+ | |||
|description=CAGE_peak_1_at_PKIG_5end | |description=CAGE_peak_1_at_PKIG_5end | ||
|id=chr20:43160458..43160598,+ | |id=chr20:43160458..43160598,+ | ||
|ontology_enrichment_celltype=CL:0002078!3.74e-08!44;CL:0000222!2.21e-07!119 | |ontology_enrichment_celltype=CL:0002078!3.74e-08!44;CL:0000222!2.21e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.53e-08,45;CL:0000222,1.09e-07,121;CL:0000213,5.11e-07,58;CL:0000215,5.11e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.94e-28!194;UBERON:0004111!4.49e-25!241;UBERON:0000477!1.83e-23!286;UBERON:0002346!4.56e-23!90;UBERON:0000119!8.93e-23!312;UBERON:0000483!9.79e-23!309;UBERON:0003075!2.92e-22!86;UBERON:0007284!2.92e-22!86;UBERON:0000475!4.22e-21!365;UBERON:0000481!1.05e-20!347;UBERON:0001049!1.17e-20!57;UBERON:0005068!1.17e-20!57;UBERON:0006241!1.17e-20!57;UBERON:0007135!1.17e-20!57;UBERON:0007023!3.48e-20!115;UBERON:0000073!7.21e-19!94;UBERON:0001016!7.21e-19!94;UBERON:0002616!9.18e-19!59;UBERON:0005743!1.01e-18!86;UBERON:0000955!2.25e-18!69;UBERON:0006238!2.25e-18!69;UBERON:0001017!5.41e-18!82;UBERON:0002780!6.64e-18!41;UBERON:0001890!6.64e-18!41;UBERON:0006240!6.64e-18!41;UBERON:0003080!1.07e-17!42;UBERON:0003056!9.50e-17!61;UBERON:0001869!1.41e-15!32;UBERON:0001893!3.65e-15!34;UBERON:0002020!5.15e-15!34;UBERON:0003528!5.15e-15!34;UBERON:0000033!8.02e-15!123;UBERON:0002791!1.33e-14!33;UBERON:0000468!3.78e-14!659;UBERON:0002619!5.36e-14!22;UBERON:0000924!9.42e-14!173;UBERON:0006601!9.42e-14!173;UBERON:0000153!3.82e-13!129;UBERON:0007811!3.82e-13!129;UBERON:0004121!5.03e-13!169;UBERON:0001950!9.15e-13!20;UBERON:0000956!1.74e-12!25;UBERON:0000203!1.74e-12!25;UBERON:0000064!2.15e-12!219;UBERON:0003914!1.17e-11!118;UBERON:0000480!2.35e-11!626;UBERON:0000467!2.43e-11!625;UBERON:0000922!5.39e-10!612;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!1.92e-09!604;UBERON:0005291!1.92e-09!604;UBERON:0006598!1.92e-09!604;UBERON:0002532!1.92e-09!604;UBERON:0002417!3.03e-08!61;UBERON:0000916!3.03e-08!61;UBERON:0002100!5.80e-08!216;UBERON:0003103!6.61e-08!69;UBERON:0005256!7.40e-08!143;UBERON:0000062!1.39e-07!511;UBERON:0005172!1.51e-07!55;UBERON:0005173!1.51e-07!55;UBERON:0005177!1.62e-07!107;UBERON:0004872!3.73e-07!84;UBERON:0000466!9.22e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.88e-14;22!UBERON:0001869;5.63e-14;32!UBERON:0001893;2.79e-13;34!UBERON:0003528;3.07e-13;34!UBERON:0002020;3.07e-13;34!UBERON:0002791;4.15e-13;32!UBERON:0002780;5.54e-13;41!UBERON:0001890;5.54e-13;41!UBERON:0001950;8.41e-13;20!UBERON:0000956;1.73e-12;25!UBERON:0000203;1.73e-12;25!UBERON:0000073;9.20e-12;53!UBERON:0002616;9.20e-12;53!UBERON:0000955;5.55e-09;68!UBERON:0001017;4.67e-08;75!UBERON:0001016;2.75e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.82e-28,192;UBERON:0004111,1.92e-25,240;UBERON:0010314,1.45e-24,132;UBERON:0002346,2.15e-22,86;UBERON:0000119,4.09e-22,309;UBERON:0000483,4.47e-22,306;UBERON:0003075,1.35e-21,82;UBERON:0007284,1.35e-21,82;UBERON:0001049,7.85e-21,56;UBERON:0005068,7.85e-21,56;UBERON:0006241,7.85e-21,56;UBERON:0007135,7.85e-21,56;UBERON:0000073,1.65e-20,53;UBERON:0002616,1.65e-20,53;UBERON:0007023,1.17e-19,114;UBERON:0000955,1.77e-18,68;UBERON:0006238,1.77e-18,68;UBERON:0001016,3.46e-18,89;UBERON:0001017,4.57e-18,81;UBERON:0002780,6.48e-18,41;UBERON:0001890,6.48e-18,41;UBERON:0003080,6.48e-18,41;UBERON:0006240,6.48e-18,41;UBERON:0003056,3.87e-17,61;UBERON:0001869,1.38e-15,32;UBERON:0001893,3.57e-15,34;UBERON:0003528,5.04e-15,34;UBERON:0002020,5.04e-15,34;UBERON:0002791,1.85e-14,32;UBERON:0010371,3.17e-14,104;UBERON:0002619,5.26e-14,22;UBERON:0004121,1.97e-13,171;UBERON:0000924,1.97e-13,171;UBERON:0006601,1.97e-13,171;UBERON:0001950,8.99e-13,20;UBERON:0000956,1.71e-12,25;UBERON:0000203,1.71e-12,25;UBERON:0011216,5.05e-12,223;UBERON:0003914,1.16e-11,117;UBERON:0000922,1.30e-09,592;UBERON:0003104,5.49e-09,160;UBERON:0009142,5.49e-09,160;UBERON:0005423,1.47e-08,581;UBERON:0002417,2.99e-08,60;UBERON:0000916,2.99e-08,60;UBERON:0003103,6.67e-08,68;UBERON:0005172,1.49e-07,54;UBERON:0005173,1.49e-07,54;UBERON:0004872,5.04e-07,83;UBERON:0002050,7.73e-07,564;UBERON:0000923,8.22e-07,560;UBERON:0010316,8.22e-07,560;UBERON:0005291,8.22e-07,560;UBERON:0006598,8.22e-07,560;UBERON:0010317,8.22e-07,560;UBERON:0002532,8.22e-07,560 | |||
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| ||
|short_description=p1@PKIG | |short_description=p1@PKIG | ||
}} | }} |
Latest revision as of 08:17, 16 September 2015
Short description: | p1@PKIG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKIG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372882, ENST00000372887, ENST00000372889_5end |
EntrezGene: | PKIG |
HGNC: | 9019 |
UniProt: | Q5H937Q9Y2B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.53e-08 | 45 |
mesodermal cell | 1.09e-07 | 121 |
lining cell | 5.11e-07 | 58 |
barrier cell | 5.11e-07 | 58 |