FFCP PHASE1:Hg19::chrX:7137671..7137692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |EntrezGene=412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11425 | |HGNC=11425 | ||
|TSSclassifier=strong | |||
|UniProt=P08842 | |UniProt=P08842 | ||
|association_with_transcript=174bp_to_ENST00000217961_5end | |association_with_transcript=174bp_to_ENST00000217961_5end | ||
|cluster_id=chrX:7137671..7137692,+ | |||
|coexpression_cluster_id=C2029 | |coexpression_cluster_id=C2029 | ||
|description=CAGE_peak_8_at_STS_5end | |description=CAGE_peak_8_at_STS_5end | ||
|id=chrX:7137671..7137692,+ | |id=chrX:7137671..7137692,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.16e-09!7;CL:0000586!1.16e-09!7;CL:0000819!2.90e-08!1;CL:0002563!1.26e-07!4 | |ontology_enrichment_celltype=CL:0000039!1.16e-09!7;CL:0000586!1.16e-09!7;CL:0000819!2.90e-08!1;CL:0002563!1.26e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.56e-26;7!CL:0000586;2.56e-26;7!CL:0000785;7.72e-21;1!CL:0000819;7.72e-21;1!CL:0000945;1.21e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.45e-26,7;CL:0000586,2.45e-26,7;CL:0000819,7.72e-21,1;CL:0000945,1.23e-13,24;CL:0000826,1.23e-13,24;CL:0000785,4.09e-11,2;CL:0000955,4.09e-11,2;CL:0000818,4.09e-11,2;CL:0000954,4.09e-11,2;CL:0000816,4.09e-11,2;CL:0000817,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.16e-21;1!CL:0000954;4.09e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.92e-11!10;DOID:0060073!2.90e-08!1;DOID:8675!2.90e-08!1;DOID:1799!3.58e-08!1;DOID:10165!3.58e-08!1;DOID:1798!3.58e-08!1 | |ontology_enrichment_disease=DOID:0060058!1.92e-11!10;DOID:0060073!2.90e-08!1;DOID:8675!2.90e-08!1;DOID:1799!3.58e-08!1;DOID:10165!3.58e-08!1;DOID:1798!3.58e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.49e-32;10!DOID:0060073;7.72e-21;1!DOID:8675;7.72e-21;1!DOID:3095;7.71e-09;22!DOID:2994;7.71e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.68e-32,10;DOID:0060073,7.72e-21,1;DOID:8675,7.72e-21,1;DOID:3095,7.61e-09,22;DOID:2994,7.61e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0002240!6.28e-10!3;UBERON:0000988!1.34e-09!3;UBERON:0002902!6.19e-08!1;UBERON:0009899!6.19e-08!1;UBERON:0001049!9.79e-08!57;UBERON:0005068!9.79e-08!57;UBERON:0006241!9.79e-08!57;UBERON:0007135!9.79e-08!57;UBERON:0001242!1.26e-07!4;UBERON:0001262!1.26e-07!4;UBERON:0004786!1.26e-07!4;UBERON:0004808!1.26e-07!4;UBERON:0001277!1.26e-07!4;UBERON:0001950!1.34e-07!20;UBERON:0003076!3.21e-07!15;UBERON:0003057!3.21e-07!15;UBERON:0002619!6.38e-07!22 | |ontology_enrichment_uberon=UBERON:0002240!6.28e-10!3;UBERON:0000988!1.34e-09!3;UBERON:0002902!6.19e-08!1;UBERON:0009899!6.19e-08!1;UBERON:0001049!9.79e-08!57;UBERON:0005068!9.79e-08!57;UBERON:0006241!9.79e-08!57;UBERON:0007135!9.79e-08!57;UBERON:0001242!1.26e-07!4;UBERON:0001262!1.26e-07!4;UBERON:0004786!1.26e-07!4;UBERON:0004808!1.26e-07!4;UBERON:0001277!1.26e-07!4;UBERON:0001950!1.34e-07!20;UBERON:0003076!3.21e-07!15;UBERON:0003057!3.21e-07!15;UBERON:0002619!6.38e-07!22 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p8@STS | |short_description=p8@STS | ||
}} | }} |
Latest revision as of 08:13, 16 September 2015
Short description: | p8@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_STS_5end |
Coexpression cluster: | C2029_choriocarcinoma_Burkitt_placenta_colon_lymphoma_breast_thalamus |
Association with transcript: | 174bp_to_ENST00000217961_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | P08842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.45e-26 | 7 |
germ cell | 2.45e-26 | 7 |
B-1 B cell | 7.72e-21 | 1 |
lymphocyte of B lineage | 1.23e-13 | 24 |
pro-B cell | 1.23e-13 | 24 |
mature B cell | 4.09e-11 | 2 |
pre-B-II cell | 4.09e-11 | 2 |
transitional stage B cell | 4.09e-11 | 2 |
small pre-B-II cell | 4.09e-11 | 2 |
immature B cell | 4.09e-11 | 2 |
precursor B cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.68e-32 | 10 |
lymphatic system cancer | 7.72e-21 | 1 |
lymphosarcoma | 7.72e-21 | 1 |
germ cell and embryonal cancer | 7.61e-09 | 22 |
germ cell cancer | 7.61e-09 | 22 |