FFCP PHASE1:Hg19::chr2:241508334..241508374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57140 | |EntrezGene=57140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10079 | |HGNC=10079 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000486058_5end | |association_with_transcript=56bp_to_ENST00000486058_5end | ||
|cluster_id=chr2:241508334..241508374,+ | |||
|description=CAGE_peak_5_at_RNPEPL1_5end | |description=CAGE_peak_5_at_RNPEPL1_5end | ||
|id=chr2:241508334..241508374,+ | |id=chr2:241508334..241508374,+ | ||
|ontology_enrichment_celltype=CL:0002087!2.13e-09!119;CL:0000766!7.57e-09!76;CL:0000738!1.52e-08!140;CL:0002194!2.83e-08!63;CL:0000576!2.83e-08!63;CL:0000040!2.83e-08!63;CL:0000559!2.83e-08!63;CL:0002031!3.89e-08!124;CL:0002057!4.53e-08!42;CL:0000839!8.01e-08!70;CL:0002009!1.94e-07!65;CL:0000557!4.37e-07!71;CL:0000860!5.71e-07!45 | |ontology_enrichment_celltype=CL:0002087!2.13e-09!119;CL:0000766!7.57e-09!76;CL:0000738!1.52e-08!140;CL:0002194!2.83e-08!63;CL:0000576!2.83e-08!63;CL:0000040!2.83e-08!63;CL:0000559!2.83e-08!63;CL:0002031!3.89e-08!124;CL:0002057!4.53e-08!42;CL:0000839!8.01e-08!70;CL:0002009!1.94e-07!65;CL:0000557!4.37e-07!71;CL:0000860!5.71e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.96e-08;39!CL:0000234;8.96e-08;39!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.17e-12,115;CL:0000766,7.01e-12,72;CL:0000738,2.67e-11,136;CL:0002194,6.21e-11,59;CL:0000576,6.21e-11,59;CL:0000040,6.21e-11,59;CL:0000559,6.21e-11,59;CL:0002031,2.07e-10,120;CL:0002009,3.79e-10,61;CL:0000839,6.80e-10,66;CL:0000557,1.50e-09,67;CL:0000473,1.70e-09,48;CL:0000234,1.70e-09,48;CL:0000860,6.83e-08,42;CL:0002057,6.83e-08,42;CL:0002320,8.76e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.74e-11!216;UBERON:0002193!8.28e-07!112;UBERON:0002390!8.85e-07!102;UBERON:0003061!8.85e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.54e-11,203;UBERON:0000926,2.35e-09,315;UBERON:0004120,2.35e-09,315;UBERON:0006603,2.35e-09,315;UBERON:0002371,3.44e-09,76;UBERON:0002405,4.73e-09,93;UBERON:0002390,1.42e-08,98;UBERON:0003061,1.42e-08,98;UBERON:0002193,3.09e-08,108;UBERON:0001474,3.53e-08,82;UBERON:0001434,2.73e-07,100;UBERON:0004765,3.28e-07,90 | |||
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| ||
|short_description=p5@RNPEPL1 | |short_description=p5@RNPEPL1 | ||
}} | }} |
Latest revision as of 08:10, 16 September 2015
Short description: | p5@RNPEPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNPEPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000486058_5end |
EntrezGene: | RNPEPL1 |
HGNC: | 10079 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.17e-12 | 115 |
myeloid leukocyte | 7.01e-12 | 72 |
leukocyte | 2.67e-11 | 136 |
monopoietic cell | 6.21e-11 | 59 |
monocyte | 6.21e-11 | 59 |
monoblast | 6.21e-11 | 59 |
promonocyte | 6.21e-11 | 59 |
hematopoietic lineage restricted progenitor cell | 2.07e-10 | 120 |
macrophage dendritic cell progenitor | 3.79e-10 | 61 |
myeloid lineage restricted progenitor cell | 6.80e-10 | 66 |
granulocyte monocyte progenitor cell | 1.50e-09 | 67 |
defensive cell | 1.70e-09 | 48 |
phagocyte | 1.70e-09 | 48 |
classical monocyte | 6.83e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.83e-08 | 42 |
connective tissue cell | 8.76e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.54e-11 | 203 |
mesoderm | 2.35e-09 | 315 |
mesoderm-derived structure | 2.35e-09 | 315 |
presumptive mesoderm | 2.35e-09 | 315 |
bone marrow | 3.44e-09 | 76 |
immune system | 4.73e-09 | 93 |
hematopoietic system | 1.42e-08 | 98 |
blood island | 1.42e-08 | 98 |
hemolymphoid system | 3.09e-08 | 108 |
bone element | 3.53e-08 | 82 |
skeletal system | 2.73e-07 | 100 |
skeletal element | 3.28e-07 | 90 |