FFCP PHASE1:Hg19::chr1:116311367..116311382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |EntrezGene=845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |HGNC=1513 | ||
|TSSclassifier=strong | |||
|UniProt=O14958 | |UniProt=O14958 | ||
|association_with_transcript=19bp_to_ENST00000261448_5end | |association_with_transcript=19bp_to_ENST00000261448_5end | ||
|cluster_id=chr1:116311367..116311382,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_CASQ2_5end | |description=CAGE_peak_3_at_CASQ2_5end | ||
|id=chr1:116311367..116311382,- | |id=chr1:116311367..116311382,- | ||
|ontology_enrichment_celltype=CL:0000188!3.73e-09!9 | |ontology_enrichment_celltype=CL:0000188!3.73e-09!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.55e-14;65!UBERON:0005062;4.02e-09;4!UBERON:0007284;4.02e-09;4!UBERON:0006965;5.38e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.38e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;4.38e-13;16!UBERON:0002036;4.38e-13;16!UBERON:0004151;3.35e-12;3!UBERON:0003978;4.93e-12;3!UBERON:0000946;4.93e-12;3!UBERON:0007100;7.09e-11;25!UBERON:0002385;1.96e-09;31!UBERON:0001015;1.96e-09;31!UBERON:0000383;1.96e-09;31!UBERON:0007023;1.09e-08;114!UBERON:0002081;1.34e-08;2!UBERON:0002133;1.90e-08;2!UBERON:0005090;2.08e-08;2!UBERON:0001630;2.08e-08;2!UBERON:0000341;2.78e-08;2!UBERON:0003127;6.53e-08;2!UBERON:0002360;9.93e-08;2!UBERON:0000094;9.93e-08;2!UBERON:0010743;9.93e-08;2 | |||
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| ||
|short_description=p3@CASQ2 | |short_description=p3@CASQ2 | ||
}} | }} |
Latest revision as of 08:08, 16 September 2015
Short description: | p3@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 19bp_to_ENST00000261448_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | O14958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.43e-38 | 114 |
cardiac chamber | 3.48e-12 | 3 |
valve | 5.02e-12 | 3 |
cardiac mesenchyme | 5.02e-12 | 3 |
cardial valve | 5.02e-12 | 3 |
tunica intima | 5.02e-12 | 3 |
heart layer | 5.02e-12 | 3 |
endocardium | 5.02e-12 | 3 |
endocardial cushion | 5.02e-12 | 3 |
presumptive endocardium | 5.02e-12 | 3 |
primary circulatory organ | 6.20e-10 | 27 |
compound organ | 7.96e-09 | 68 |
cardiac atrium | 1.39e-08 | 2 |
future cardiac atrium | 1.39e-08 | 2 |
atrioventricular valve | 1.93e-08 | 2 |
muscle structure | 2.08e-08 | 2 |
muscle organ | 2.08e-08 | 2 |
throat | 2.78e-08 | 2 |
open tracheal system trachea | 5.88e-08 | 2 |
meninx | 8.64e-08 | 2 |
membrane organ | 8.64e-08 | 2 |
meningeal cluster | 8.64e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.38e-09 | 2 |