FFCP PHASE1:Hg19::chr1:116311348..116311360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |EntrezGene=845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |HGNC=1513 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIB0 | |UniProt=B4DIB0 | ||
|association_with_transcript=-13bp_to_ENST00000456138_5end | |association_with_transcript=-13bp_to_ENST00000456138_5end | ||
|cluster_id=chr1:116311348..116311360,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_CASQ2_5end | |description=CAGE_peak_2_at_CASQ2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!6.35e-11!9 | |ontology_enrichment_celltype=CL:0000188!6.35e-11!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;5.12e-08;9 | |ontology_enrichment_celltype_v019=CL:0000188;5.12e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.67e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.12e-12;65!UBERON:0005062;3.17e-08;4!UBERON:0007284;3.17e-08;4!UBERON:0006965;2.87e-07;2!UBERON:0007297;6.49e-07;2 | |ontology_enrichment_development_v019=UBERON:0006603;1.12e-12;65!UBERON:0005062;3.17e-08;4!UBERON:0007284;3.17e-08;4!UBERON:0006965;2.87e-07;2!UBERON:0007297;6.49e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.86e-08;2 | |ontology_enrichment_disease_v019=DOID:114;5.86e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,5.87e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;3.56e-17;16!UBERON:0002036;3.56e-17;16!UBERON:0002385;1.61e-11;31!UBERON:0001015;1.61e-11;31!UBERON:0000383;1.61e-11;31!UBERON:0004151;6.11e-11;3!UBERON:0003978;7.41e-11;3!UBERON:0000946;7.41e-11;3!UBERON:0007023;2.88e-10;114!UBERON:0006947;1.59e-09;3!UBERON:0004054;1.59e-09;3!UBERON:0007100;1.95e-09;25!UBERON:0002081;8.83e-08;2!UBERON:0002133;1.04e-07;2!UBERON:0000341;1.53e-07;2!UBERON:0005090;1.91e-07;2!UBERON:0001630;1.91e-07;2!UBERON:0005904;3.03e-07;4!UBERON:0003127;4.71e-07;2!UBERON:0002360;6.02e-07;2!UBERON:0000094;6.02e-07;2!UBERON:0010743;6.02e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.56e-17;16!UBERON:0002036;3.56e-17;16!UBERON:0002385;1.61e-11;31!UBERON:0001015;1.61e-11;31!UBERON:0000383;1.61e-11;31!UBERON:0004151;6.11e-11;3!UBERON:0003978;7.41e-11;3!UBERON:0000946;7.41e-11;3!UBERON:0007023;2.88e-10;114!UBERON:0006947;1.59e-09;3!UBERON:0004054;1.59e-09;3!UBERON:0007100;1.95e-09;25!UBERON:0002081;8.83e-08;2!UBERON:0002133;1.04e-07;2!UBERON:0000341;1.53e-07;2!UBERON:0005090;1.91e-07;2!UBERON:0001630;1.91e-07;2!UBERON:0005904;3.03e-07;4!UBERON:0003127;4.71e-07;2!UBERON:0002360;6.02e-07;2!UBERON:0000094;6.02e-07;2!UBERON:0010743;6.02e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.54e-42,114;UBERON:0004151,6.21e-11,3;UBERON:0003978,7.54e-11,3;UBERON:0009751,7.54e-11,3;UBERON:0000946,7.54e-11,3;UBERON:0002523,7.54e-11,3;UBERON:0005983,7.54e-11,3;UBERON:0002165,7.54e-11,3;UBERON:0002062,7.54e-11,3;UBERON:0007280,7.54e-11,3;UBERON:0006947,1.37e-09,3;UBERON:0004054,1.37e-09,3;UBERON:0007100,1.35e-08,27;UBERON:0003103,1.98e-08,68;UBERON:0002081,8.98e-08,2;UBERON:0010227,8.98e-08,2;UBERON:0002133,1.06e-07,2;UBERON:0000341,1.50e-07,2;UBERON:0005090,1.88e-07,2;UBERON:0001630,1.88e-07,2;UBERON:0005904,2.72e-07,4;UBERON:0003127,4.94e-07,2;UBERON:0002360,5.75e-07,2;UBERON:0000094,5.75e-07,2;UBERON:0010743,5.75e-07,2 | |||
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|short_description=p2@CASQ2 | |short_description=p2@CASQ2 | ||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p2@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -13bp_to_ENST00000456138_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | B4DIB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.67e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.54e-42 | 114 |
cardiac chamber | 6.21e-11 | 3 |
valve | 7.54e-11 | 3 |
cardiac mesenchyme | 7.54e-11 | 3 |
cardial valve | 7.54e-11 | 3 |
tunica intima | 7.54e-11 | 3 |
heart layer | 7.54e-11 | 3 |
endocardium | 7.54e-11 | 3 |
endocardial cushion | 7.54e-11 | 3 |
presumptive endocardium | 7.54e-11 | 3 |
male genital duct | 1.37e-09 | 3 |
internal male genitalia | 1.37e-09 | 3 |
primary circulatory organ | 1.35e-08 | 27 |
compound organ | 1.98e-08 | 68 |
cardiac atrium | 8.98e-08 | 2 |
future cardiac atrium | 8.98e-08 | 2 |
atrioventricular valve | 1.06e-07 | 2 |
throat | 1.50e-07 | 2 |
muscle structure | 1.88e-07 | 2 |
muscle organ | 1.88e-07 | 2 |
duct of male reproductive system | 2.72e-07 | 4 |
open tracheal system trachea | 4.94e-07 | 2 |
meninx | 5.75e-07 | 2 |
membrane organ | 5.75e-07 | 2 |
meningeal cluster | 5.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.87e-08 | 2 |