FFCP PHASE1:Hg19::chr6:154567956..154567970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26034 | |EntrezGene=26034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21204 | |HGNC=21204 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJQ7 | |UniProt=E5RJQ7 | ||
|association_with_transcript=19bp_to_ENST00000517438_5end | |association_with_transcript=19bp_to_ENST00000517438_5end | ||
|cluster_id=chr6:154567956..154567970,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_12_at_IPCEF1_5end | |description=CAGE_peak_12_at_IPCEF1_5end | ||
|id=chr6:154567956..154567970,- | |id=chr6:154567956..154567970,- | ||
|ontology_enrichment_celltype=CL:0000817!1.75e-13!3;CL:0000945!1.37e-12!24;CL:0000826!1.37e-12!24;CL:0000838!3.09e-12!52;CL:0000542!6.03e-12!53;CL:0000051!6.03e-12!53;CL:0000785!1.89e-09!2;CL:0000955!1.89e-09!2;CL:0000818!1.89e-09!2;CL:0000954!1.89e-09!2;CL:0000816!1.89e-09!2;CL:0002087!1.07e-07!119;CL:0000738!1.18e-07!140;CL:0002031!3.16e-07!124 | |ontology_enrichment_celltype=CL:0000817!1.75e-13!3;CL:0000945!1.37e-12!24;CL:0000826!1.37e-12!24;CL:0000838!3.09e-12!52;CL:0000542!6.03e-12!53;CL:0000051!6.03e-12!53;CL:0000785!1.89e-09!2;CL:0000955!1.89e-09!2;CL:0000818!1.89e-09!2;CL:0000954!1.89e-09!2;CL:0000816!1.89e-09!2;CL:0002087!1.07e-07!119;CL:0000738!1.18e-07!140;CL:0002031!3.16e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000817;3.16e-29;1!CL:0000945;2.33e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.22e-19,24;CL:0000826,2.22e-19,24;CL:0000817,9.90e-11,3;CL:0000838,3.16e-09,52;CL:0000542,4.63e-09,53;CL:0000051,4.63e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!3.89e-13!20;UBERON:0002619!7.38e-12!22;UBERON:0001869!1.05e-11!32;UBERON:0002791!2.69e-11!33;UBERON:0002020!6.51e-11!34;UBERON:0003528!6.51e-11!34;UBERON:0001893!6.51e-11!34;UBERON:0000956!2.60e-10!25;UBERON:0000203!2.60e-10!25;UBERON:0002780!9.63e-09!41;UBERON:0001890!9.63e-09!41;UBERON:0006240!9.63e-09!41;UBERON:0003080!1.72e-08!42;UBERON:0001049!6.09e-07!57;UBERON:0005068!6.09e-07!57;UBERON:0006241!6.09e-07!57;UBERON:0007135!6.09e-07!57 | |ontology_enrichment_uberon=UBERON:0001950!3.89e-13!20;UBERON:0002619!7.38e-12!22;UBERON:0001869!1.05e-11!32;UBERON:0002791!2.69e-11!33;UBERON:0002020!6.51e-11!34;UBERON:0003528!6.51e-11!34;UBERON:0001893!6.51e-11!34;UBERON:0000956!2.60e-10!25;UBERON:0000203!2.60e-10!25;UBERON:0002780!9.63e-09!41;UBERON:0001890!9.63e-09!41;UBERON:0006240!9.63e-09!41;UBERON:0003080!1.72e-08!42;UBERON:0001049!6.09e-07!57;UBERON:0005068!6.09e-07!57;UBERON:0006241!6.09e-07!57;UBERON:0007135!6.09e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.73e-11;3!UBERON:0004177;4.79e-07;5!UBERON:0005057;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3 | |||
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| ||
|short_description=p12@IPCEF1 | |short_description=p12@IPCEF1 | ||
}} | }} |
Latest revision as of 08:05, 16 September 2015
Short description: | p12@IPCEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IPCEF1_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 19bp_to_ENST00000517438_5end |
EntrezGene: | IPCEF1 |
HGNC: | 21204 |
UniProt: | E5RJQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.22e-19 | 24 |
pro-B cell | 2.22e-19 | 24 |
precursor B cell | 9.90e-11 | 3 |
lymphoid lineage restricted progenitor cell | 3.16e-09 | 52 |
lymphocyte | 4.63e-09 | 53 |
common lymphoid progenitor | 4.63e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |