FFCP PHASE1:Hg19::chr14:81422021..81422032,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |||
|TSSclassifier=strong | |||
|UniProt=Q0VAP8,G3V2A9 | |||
|association_with_transcript=22bp_to_ENST00000554263,ENST00000554435_5end | |||
|cluster_id=chr14:81422021..81422032,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_6_at_TSHR_5end | |||
|id=chr14:81422021..81422032,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.05e-32;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.38e-21!2;UBERON:0003127!3.84e-21!2;UBERON:0000974!2.91e-16!10;UBERON:0009722!7.19e-15!11;UBERON:0007690!7.19e-15!11;UBERON:0008814!5.78e-11!15;UBERON:0002370!1.09e-10!4;UBERON:0005058!1.09e-10!4;UBERON:0009113!1.09e-10!4;UBERON:0003295!1.09e-10!4;UBERON:0005562!1.09e-10!4;UBERON:0002046!2.88e-09!5;UBERON:0004117!2.88e-09!5;UBERON:0007689!2.88e-09!5;UBERON:0007123!2.88e-09!5;UBERON:0003091!2.88e-09!5;UBERON:0003351!2.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.22e-79;2!UBERON:0002046;1.05e-32;5!UBERON:0000974;3.11e-27;6!UBERON:0003127;6.96e-21;2!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.22e-79,2;UBERON:0002046,1.05e-32,5;UBERON:0004117,1.05e-32,5;UBERON:0007689,1.05e-32,5;UBERON:0007123,1.05e-32,5;UBERON:0003091,1.05e-32,5;UBERON:0003127,6.96e-21,2;UBERON:0000974,8.13e-17,10;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983617892129413,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,12.855479299042,0.193766729508018,0.0620747142958579,0,20.5580321238473,45.0721331376829,0,0,0,0.215166616178029,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TSHR | |||
}} |
Latest revision as of 07:58, 16 September 2015
Short description: | p6@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TSHR_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 22bp_to_ENST00000554263, ENST00000554435_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | Q0VAP8G3V2A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.22e-79 | 2 |
thyroid gland | 1.05e-32 | 5 |
pharyngeal pouch | 1.05e-32 | 5 |
thyroid diverticulum | 1.05e-32 | 5 |
pharyngeal pouch 2 | 1.05e-32 | 5 |
thyroid primordium | 1.05e-32 | 5 |
open tracheal system trachea | 6.96e-21 | 2 |
neck | 8.13e-17 | 10 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |