FFCP PHASE1:Hg19::chr6:154360616..154360626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4988 | |EntrezGene=4988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8156 | |HGNC=8156 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWZ3 | |UniProt=E7EWZ3 | ||
|association_with_transcript=2bp_to_ENST00000524150_5end | |association_with_transcript=2bp_to_ENST00000524150_5end | ||
|cluster_id=chr6:154360616..154360626,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_OPRM1_5end | |description=CAGE_peak_10_at_OPRM1_5end | ||
|id=chr6:154360616..154360626,+ | |id=chr6:154360616..154360626,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.27e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;9.07e-18;6!DOID:171;3.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.07e-18,6;DOID:171,3.02e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-40!57;UBERON:0005068!1.28e-40!57;UBERON:0006241!1.28e-40!57;UBERON:0007135!1.28e-40!57;UBERON:0002616!3.32e-39!59;UBERON:0000955!1.22e-37!69;UBERON:0006238!1.22e-37!69;UBERON:0002298!1.72e-34!8;UBERON:0000988!1.48e-33!3;UBERON:0004733!5.13e-33!12;UBERON:0002028!5.13e-33!12;UBERON:0007277!5.13e-33!12;UBERON:0001017!1.64e-31!82;UBERON:0000073!8.64e-31!94;UBERON:0001016!8.64e-31!94;UBERON:0004732!1.84e-30!13;UBERON:0005743!5.45e-30!86;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0003076!2.27e-26!15;UBERON:0003057!2.27e-26!15;UBERON:0007023!1.36e-25!115;UBERON:0002346!3.35e-25!90;UBERON:0002020!2.35e-24!34;UBERON:0003528!2.35e-24!34;UBERON:0000033!2.23e-23!123;UBERON:0002148!3.49e-23!2;UBERON:0009662!3.49e-23!2;UBERON:0000153!3.28e-22!129;UBERON:0007811!3.28e-22!129;UBERON:0002680!4.75e-20!9;UBERON:0001895!4.75e-20!9;UBERON:0010092!4.75e-20!9;UBERON:0002780!5.27e-20!41;UBERON:0001890!5.27e-20!41;UBERON:0006240!5.27e-20!41;UBERON:0002791!9.34e-20!33;UBERON:0003080!1.63e-19!42;UBERON:0001893!3.61e-19!34;UBERON:0000200!2.97e-17!6;UBERON:0002619!5.94e-17!22;UBERON:0004121!1.92e-16!169;UBERON:0002771!4.99e-16!3;UBERON:0000924!5.10e-16!173;UBERON:0006601!5.10e-16!173;UBERON:0001896!6.26e-16!3;UBERON:0005290!6.26e-16!3;UBERON:0010096!6.26e-16!3;UBERON:0006331!8.44e-16!3;UBERON:0001869!1.04e-15!32;UBERON:0000956!5.84e-15!25;UBERON:0000203!5.84e-15!25;UBERON:0003056!3.30e-13!61;UBERON:0001950!3.99e-13!20;UBERON:0003112!1.96e-12!1;UBERON:0000032!1.96e-12!1;UBERON:0005253!1.96e-12!1;UBERON:0003128!1.96e-12!1;UBERON:0002241!1.96e-12!1;UBERON:0001703!1.96e-12!1;UBERON:0004761!1.96e-12!1;UBERON:0009617!1.96e-12!1;UBERON:0002336!3.85e-12!1;UBERON:0001018!3.85e-12!1;UBERON:0002473!3.85e-12!1;UBERON:0005340!3.85e-12!1;UBERON:0002316!3.85e-12!1;UBERON:0003544!3.85e-12!1;UBERON:0001020!3.85e-12!1;UBERON:0005970!3.85e-12!1;UBERON:0002437!3.85e-12!1;UBERON:0002581!4.31e-12!1;UBERON:0001882!4.81e-12!1;UBERON:0005403!4.81e-12!1;UBERON:0002308!1.41e-11!9;UBERON:0000125!1.41e-11!9;UBERON:0000025!1.17e-10!194;UBERON:0001872!1.01e-09!5;UBERON:0000349!1.21e-09!5;UBERON:0004111!3.66e-08!241;UBERON:0000477!1.17e-07!286;UBERON:0001954!8.06e-07!2;UBERON:0003022!8.06e-07!2;UBERON:0002421!8.06e-07!2;UBERON:0002600!8.06e-07!2;UBERON:0001870!9.02e-07!2;UBERON:0001897!9.54e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.28e-40!57;UBERON:0005068!1.28e-40!57;UBERON:0006241!1.28e-40!57;UBERON:0007135!1.28e-40!57;UBERON:0002616!3.32e-39!59;UBERON:0000955!1.22e-37!69;UBERON:0006238!1.22e-37!69;UBERON:0002298!1.72e-34!8;UBERON:0000988!1.48e-33!3;UBERON:0004733!5.13e-33!12;UBERON:0002028!5.13e-33!12;UBERON:0007277!5.13e-33!12;UBERON:0001017!1.64e-31!82;UBERON:0000073!8.64e-31!94;UBERON:0001016!8.64e-31!94;UBERON:0004732!1.84e-30!13;UBERON:0005743!5.45e-30!86;UBERON:0003075!1.89e-26!86;UBERON:0007284!1.89e-26!86;UBERON:0003076!2.27e-26!15;UBERON:0003057!2.27e-26!15;UBERON:0007023!1.36e-25!115;UBERON:0002346!3.35e-25!90;UBERON:0002020!2.35e-24!34;UBERON:0003528!2.35e-24!34;UBERON:0000033!2.23e-23!123;UBERON:0002148!3.49e-23!2;UBERON:0009662!3.49e-23!2;UBERON:0000153!3.28e-22!129;UBERON:0007811!3.28e-22!129;UBERON:0002680!4.75e-20!9;UBERON:0001895!4.75e-20!9;UBERON:0010092!4.75e-20!9;UBERON:0002780!5.27e-20!41;UBERON:0001890!5.27e-20!41;UBERON:0006240!5.27e-20!41;UBERON:0002791!9.34e-20!33;UBERON:0003080!1.63e-19!42;UBERON:0001893!3.61e-19!34;UBERON:0000200!2.97e-17!6;UBERON:0002619!5.94e-17!22;UBERON:0004121!1.92e-16!169;UBERON:0002771!4.99e-16!3;UBERON:0000924!5.10e-16!173;UBERON:0006601!5.10e-16!173;UBERON:0001896!6.26e-16!3;UBERON:0005290!6.26e-16!3;UBERON:0010096!6.26e-16!3;UBERON:0006331!8.44e-16!3;UBERON:0001869!1.04e-15!32;UBERON:0000956!5.84e-15!25;UBERON:0000203!5.84e-15!25;UBERON:0003056!3.30e-13!61;UBERON:0001950!3.99e-13!20;UBERON:0003112!1.96e-12!1;UBERON:0000032!1.96e-12!1;UBERON:0005253!1.96e-12!1;UBERON:0003128!1.96e-12!1;UBERON:0002241!1.96e-12!1;UBERON:0001703!1.96e-12!1;UBERON:0004761!1.96e-12!1;UBERON:0009617!1.96e-12!1;UBERON:0002336!3.85e-12!1;UBERON:0001018!3.85e-12!1;UBERON:0002473!3.85e-12!1;UBERON:0005340!3.85e-12!1;UBERON:0002316!3.85e-12!1;UBERON:0003544!3.85e-12!1;UBERON:0001020!3.85e-12!1;UBERON:0005970!3.85e-12!1;UBERON:0002437!3.85e-12!1;UBERON:0002581!4.31e-12!1;UBERON:0001882!4.81e-12!1;UBERON:0005403!4.81e-12!1;UBERON:0002308!1.41e-11!9;UBERON:0000125!1.41e-11!9;UBERON:0000025!1.17e-10!194;UBERON:0001872!1.01e-09!5;UBERON:0000349!1.21e-09!5;UBERON:0004111!3.66e-08!241;UBERON:0000477!1.17e-07!286;UBERON:0001954!8.06e-07!2;UBERON:0003022!8.06e-07!2;UBERON:0002421!8.06e-07!2;UBERON:0002600!8.06e-07!2;UBERON:0001870!9.02e-07!2;UBERON:0001897!9.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0002037;7.67e-18;6!UBERON:0002680;2.19e-12;9!UBERON:0001895;2.19e-12;9!UBERON:0000010;2.45e-12;8!UBERON:0004733;1.22e-09;12!UBERON:0002028;1.22e-09;12!UBERON:0004732;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0000010,2.45e-12,8;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42795705786796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74735421107222,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42795705786796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74735421107222,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@OPRM1 | |short_description=p10@OPRM1 | ||
}} | }} |
Latest revision as of 07:57, 16 September 2015
Short description: | p10@OPRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_OPRM1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 2bp_to_ENST00000524150_5end |
EntrezGene: | OPRM1 |
HGNC: | 8156 |
UniProt: | E7EWZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |