FFCP PHASE1:Hg19::chr17:5487373..5487386,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:5487373..5487386,- to FFCP PHASE1:Hg19::chr17:5487373..5487386,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22861 | |EntrezGene=22861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14374 | |HGNC=14374 | ||
|TSSclassifier=strong | |||
|UniProt=E9PE50 | |UniProt=E9PE50 | ||
|association_with_transcript=442bp_to_ENST00000544378_5end | |||
|cluster_id=chr17:5487373..5487386,- | |||
|description=CAGE_peak_5_at_NLRP1_5end | |||
|id=chr17:5487373..5487386,- | |||
|ontology_enrichment_celltype=CL:0002368!1.57e-10!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.60e-30;13!CL:0000307;2.34e-19;3!CL:0002621;6.10e-19;3!CL:0002202;4.17e-17;9!CL:0002632;4.17e-17;9!CL:1000306;1.65e-14;4!CL:0002547;1.65e-14;4!CL:0000317;1.60e-13;2!CL:1000448;1.60e-13;2!CL:0002308;1.60e-13;2!CL:0002140;1.60e-13;2!CL:0002076;3.04e-13;42!CL:0000362;2.66e-11;9!CL:0002328;3.51e-09;3!CL:0002592;5.96e-09;3!CL:0002581;2.49e-07;1!CL:0002159;2.70e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.93e-30,13;CL:0000068,2.15e-19,3;CL:0000069,2.15e-19,3;CL:0000307,2.15e-19,3;CL:0000377,2.15e-19,3;CL:0002621,4.52e-19,3;CL:0002202,2.66e-17,9;CL:0002632,2.66e-17,9;CL:0002076,5.27e-16,42;CL:1000306,2.29e-14,4;CL:0002547,2.29e-14,4;CL:0000317,1.51e-13,2;CL:1000448,1.51e-13,2;CL:0002308,1.51e-13,2;CL:0002140,1.51e-13,2;CL:0000362,3.14e-11,9;CL:0000223,5.09e-11,58;CL:0002328,2.15e-09,3;CL:0002592,4.88e-09,3;CL:0002321,3.28e-08,250;CL:0002581,1.83e-07,1;CL:0002159,2.99e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000377;2.34e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;5.51e-13;2!DOID:962;5.51e-13;2!DOID:1192;5.96e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,8.46e-13,2;DOID:962,8.46e-13,2;DOID:1192,7.91e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0001637!4.42e-09!42;UBERON:0003509!4.42e-09!42;UBERON:0004572!4.42e-09!42;UBERON:0000947!8.10e-09!21;UBERON:0010191!8.10e-09!21;UBERON:0000055!5.75e-08!69;UBERON:0001981!6.56e-08!60;UBERON:0007500!6.56e-08!60;UBERON:0004537!6.56e-08!60;UBERON:0006965!6.56e-08!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.10e-19;3!UBERON:0004797;1.65e-14;4!UBERON:0000415;1.65e-14;4!UBERON:0007240;1.65e-14;4!UBERON:0005742;1.65e-14;4!UBERON:0005734;1.65e-14;4!UBERON:0004664;1.65e-14;4!UBERON:0004663;1.65e-14;4!UBERON:0002419;1.60e-13;2!UBERON:0007771;1.60e-13;2!UBERON:0003297;1.60e-13;2!UBERON:0001821;1.60e-13;2!UBERON:0003487;1.60e-13;2!UBERON:0001820;1.60e-13;2!UBERON:0004573;7.15e-11;33!UBERON:0004571;7.15e-11;33!UBERON:0007196;3.52e-10;15!UBERON:0001558;3.52e-10;15!UBERON:0000947;6.44e-10;21!UBERON:0010191;6.44e-10;21!UBERON:0001637;8.79e-10;42!UBERON:0003509;8.79e-10;42!UBERON:0004572;8.79e-10;42!UBERON:0004815;3.51e-09;3!UBERON:0002031;3.51e-09;3!UBERON:0010371;5.23e-09;31!UBERON:0003498;5.96e-09;3!UBERON:0005985;5.96e-09;3!UBERON:0001621;5.96e-09;3!UBERON:0003126;1.39e-08;7!UBERON:0001005;1.39e-08;7!UBERON:0003929;2.07e-08;7!UBERON:0000486;2.74e-08;12!UBERON:0003350;2.06e-07;8!UBERON:0001828;2.06e-07;8!UBERON:0001003;8.20e-07;15!UBERON:0007376;8.20e-07;15!UBERON:0004807;8.99e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.52e-19,3;UBERON:0000415,2.29e-14,4;UBERON:0007240,2.29e-14,4;UBERON:0005742,2.29e-14,4;UBERON:0005734,2.29e-14,4;UBERON:0004664,2.29e-14,4;UBERON:0004663,2.29e-14,4;UBERON:0002419,1.51e-13,2;UBERON:0007771,1.51e-13,2;UBERON:0003297,1.51e-13,2;UBERON:0001821,1.51e-13,2;UBERON:0003487,1.51e-13,2;UBERON:0001820,1.51e-13,2;UBERON:0005089,1.51e-13,2;UBERON:0005088,1.51e-13,2;UBERON:0004573,2.35e-13,33;UBERON:0004571,2.35e-13,33;UBERON:0007196,2.71e-10,15;UBERON:0001558,2.71e-10,15;UBERON:0001637,3.48e-10,42;UBERON:0003509,3.48e-10,42;UBERON:0004572,3.48e-10,42;UBERON:0000947,7.48e-10,21;UBERON:0010191,7.48e-10,21;UBERON:0004815,2.15e-09,3;UBERON:0002031,2.15e-09,3;UBERON:0001621,4.88e-09,3;UBERON:0003126,1.34e-08,7;UBERON:0001005,1.34e-08,7;UBERON:0004797,2.02e-08,7;UBERON:0001004,3.38e-08,74;UBERON:0003350,1.84e-07,8;UBERON:0001828,1.84e-07,8;UBERON:0007500,7.66e-07,59;UBERON:0001981,7.66e-07,59;UBERON:0004537,7.66e-07,59;UBERON:0006965,7.66e-07,59;UBERON:0001003,9.01e-07,15;UBERON:0007376,9.01e-07,15;UBERON:0007383,9.01e-07,15 | |||
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| ||
|short_description=p5@NLRP1 | |||
}} | }} |
Latest revision as of 07:56, 16 September 2015
Short description: | p5@NLRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NLRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 442bp_to_ENST00000544378_5end |
EntrezGene: | NLRP1 |
HGNC: | 14374 |
UniProt: | E9PE50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.93e-30 | 13 |
duct epithelial cell | 2.15e-19 | 3 |
branched duct epithelial cell | 2.15e-19 | 3 |
tracheal epithelial cell | 2.15e-19 | 3 |
tracheoblast | 2.15e-19 | 3 |
gingival epithelial cell | 4.52e-19 | 3 |
epithelial cell of tracheobronchial tree | 2.66e-17 | 9 |
epithelial cell of lower respiratory tract | 2.66e-17 | 9 |
endo-epithelial cell | 5.27e-16 | 42 |
fibroblast of tunica adventitia of artery | 2.29e-14 | 4 |
fibroblast of the aortic adventitia | 2.29e-14 | 4 |
sebum secreting cell | 1.51e-13 | 2 |
epithelial cell of sweat gland | 1.51e-13 | 2 |
epithelial cell of skin gland | 1.51e-13 | 2 |
acinar cell of sebaceous gland | 1.51e-13 | 2 |
epidermal cell | 3.14e-11 | 9 |
endodermal cell | 5.09e-11 | 58 |
bronchial epithelial cell | 2.15e-09 | 3 |
smooth muscle cell of the coronary artery | 4.88e-09 | 3 |
embryonic cell | 3.28e-08 | 250 |
perirenal preadipocyte | 1.83e-07 | 1 |
general ecto-epithelial cell | 2.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 8.46e-13 | 2 |
neurofibroma | 8.46e-13 | 2 |
peripheral nervous system neoplasm | 7.91e-09 | 3 |