FFCP PHASE1:Hg19::chr11:122022942..122022947,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:122022942..122022947,-
|short_description=p1@MIR100
|description=CAGE_peak_1_at_MIR100_5end
|association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=406892 | |EntrezGene=406892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31487 | |HGNC=31487 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end | |||
|cluster_id=chr11:122022942..122022947,- | |||
|coexpression_cluster_id=C3103 | |||
|description=CAGE_peak_1_at_MIR100_5end | |||
|id=chr11:122022942..122022947,- | |||
|ontology_enrichment_celltype=CL:0000057!8.25e-23!75;CL:0000055!1.45e-20!180;CL:0002620!2.14e-14!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;6.96e-21;4!CL:0002547;6.96e-21;4!CL:0000057;5.92e-09;73!CL:0002620;7.15e-08;23!CL:0000135;1.52e-07;3!CL:0000388;1.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-24,76;CL:1000306,8.20e-21,4;CL:0002547,8.20e-21,4;CL:0002620,7.73e-08,23;CL:0000135,1.13e-07,3;CL:0000388,1.13e-07,3;CL:0000048,8.70e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.95e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.96e-21;4!UBERON:0000415;6.96e-21;4!UBERON:0007240;6.96e-21;4!UBERON:0005742;6.96e-21;4!UBERON:0005734;6.96e-21;4!UBERON:0004664;6.96e-21;4!UBERON:0004663;6.96e-21;4!UBERON:0000947;2.81e-08;21!UBERON:0010191;2.81e-08;21!UBERON:0007846;1.52e-07;3!UBERON:0000043;1.52e-07;3!UBERON:0007845;1.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,8.20e-21,4;UBERON:0007240,8.20e-21,4;UBERON:0005742,8.20e-21,4;UBERON:0005734,8.20e-21,4;UBERON:0004664,8.20e-21,4;UBERON:0004663,8.20e-21,4;UBERON:0004797,5.90e-12,7;UBERON:0000947,2.75e-08,21;UBERON:0010191,2.75e-08,21;UBERON:0007846,1.13e-07,3;UBERON:0000043,1.13e-07,3;UBERON:0007845,1.13e-07,3;UBERON:0003102,3.97e-07,99 | |||
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| ||
|short_description=p1@MIR100 | |||
}} | }} |
Latest revision as of 07:44, 16 September 2015
Short description: | p1@MIR100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR100_5end |
Coexpression cluster: | C3103_Fibroblast_prostate_Olfactory_Smooth_meningioma_Preadipocyte_Myoblast |
Association with transcript: | 68bp_to_NR_029515, uc001pyh.1_5end |
EntrezGene: | MIR100 |
HGNC: | 31487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-24 | 76 |
fibroblast of tunica adventitia of artery | 8.20e-21 | 4 |
fibroblast of the aortic adventitia | 8.20e-21 | 4 |
skin fibroblast | 7.73e-08 | 23 |
fibrocyte | 1.13e-07 | 3 |
tendon cell | 1.13e-07 | 3 |
multi fate stem cell | 8.70e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
artery wall | 8.20e-21 | 4 |
tunica adventitia of artery | 8.20e-21 | 4 |
adventitia | 8.20e-21 | 4 |
tunica adventitia of blood vessel | 8.20e-21 | 4 |
aorta tunica adventitia | 8.20e-21 | 4 |
aorta wall | 8.20e-21 | 4 |
blood vessel layer | 5.90e-12 | 7 |
aorta | 2.75e-08 | 21 |
aortic system | 2.75e-08 | 21 |
dense regular connective tissue | 1.13e-07 | 3 |
tendon | 1.13e-07 | 3 |
regular connective tissue | 1.13e-07 | 3 |
surface structure | 3.97e-07 | 99 |