FFCP PHASE1:Hg19::chr9:136603456..136603476,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1757 | |EntrezGene=1757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10536 | |HGNC=10536 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SYV1,F5H3F4 | |UniProt=Q5SYV1,F5H3F4 | ||
|association_with_transcript=0bp_to_ENST00000427237,ENST00000535281_5end | |association_with_transcript=0bp_to_ENST00000427237,ENST00000535281_5end | ||
|cluster_id=chr9:136603456..136603476,- | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_SARDH_5end | |description=CAGE_peak_1_at_SARDH_5end | ||
|id=chr9:136603456..136603476,- | |id=chr9:136603456..136603476,- | ||
|ontology_enrichment_celltype=CL:0000055!2.56e-08!180;CL:0000680!4.19e-07!57;CL:0000056!4.19e-07!57;CL:0000355!4.19e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.56e-08!180;CL:0000680!4.19e-07!57;CL:0000056!4.19e-07!57;CL:0000355!4.19e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002321;7.18e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.57e-07,58;CL:0000056,2.57e-07,58;CL:0000355,2.57e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.36e-10!94;UBERON:0001016!3.36e-10!94;UBERON:0007023!6.99e-10!115;UBERON:0003075!7.89e-10!86;UBERON:0007284!7.89e-10!86;UBERON:0002346!1.12e-09!90;UBERON:0005743!2.25e-09!86;UBERON:0000481!2.63e-09!347;UBERON:0001017!9.82e-09!82;UBERON:0000475!1.24e-08!365;UBERON:0000483!3.57e-08!309;UBERON:0000119!4.18e-08!312;UBERON:0000153!3.21e-07!129;UBERON:0007811!3.21e-07!129;UBERON:0000033!3.61e-07!123;UBERON:0002385!3.96e-07!63;UBERON:0001015!3.96e-07!63;UBERON:0000383!3.96e-07!63;UBERON:0000955!4.05e-07!69;UBERON:0006238!4.05e-07!69;UBERON:0003056!4.13e-07!61;UBERON:0001134!4.20e-07!61;UBERON:0002036!4.20e-07!61;UBERON:0003082!4.20e-07!61;UBERON:0002616!7.89e-07!59;UBERON:0000924!8.03e-07!173;UBERON:0006601!8.03e-07!173;UBERON:0004121!8.29e-07!169;UBERON:0001049!8.81e-07!57;UBERON:0005068!8.81e-07!57;UBERON:0006241!8.81e-07!57;UBERON:0007135!8.81e-07!57 | |ontology_enrichment_uberon=UBERON:0000073!3.36e-10!94;UBERON:0001016!3.36e-10!94;UBERON:0007023!6.99e-10!115;UBERON:0003075!7.89e-10!86;UBERON:0007284!7.89e-10!86;UBERON:0002346!1.12e-09!90;UBERON:0005743!2.25e-09!86;UBERON:0000481!2.63e-09!347;UBERON:0001017!9.82e-09!82;UBERON:0000475!1.24e-08!365;UBERON:0000483!3.57e-08!309;UBERON:0000119!4.18e-08!312;UBERON:0000153!3.21e-07!129;UBERON:0007811!3.21e-07!129;UBERON:0000033!3.61e-07!123;UBERON:0002385!3.96e-07!63;UBERON:0001015!3.96e-07!63;UBERON:0000383!3.96e-07!63;UBERON:0000955!4.05e-07!69;UBERON:0006238!4.05e-07!69;UBERON:0003056!4.13e-07!61;UBERON:0001134!4.20e-07!61;UBERON:0002036!4.20e-07!61;UBERON:0003082!4.20e-07!61;UBERON:0002616!7.89e-07!59;UBERON:0000924!8.03e-07!173;UBERON:0006601!8.03e-07!173;UBERON:0004121!8.29e-07!169;UBERON:0001049!8.81e-07!57;UBERON:0005068!8.81e-07!57;UBERON:0006241!8.81e-07!57;UBERON:0007135!8.81e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.83e-07;16!UBERON:0002036;6.83e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.46e-10,86;UBERON:0003075,2.31e-10,82;UBERON:0007284,2.31e-10,82;UBERON:0001016,3.35e-08,89;UBERON:0000483,1.04e-07,306;UBERON:0001017,1.83e-07,81;UBERON:0000119,2.51e-07,309;UBERON:0001134,2.99e-07,62;UBERON:0002036,2.99e-07,62;UBERON:0003082,2.99e-07,62;UBERON:0010314,3.91e-07,132;UBERON:0003056,5.19e-07,61;UBERON:0005256,6.64e-07,122;UBERON:0010371,7.01e-07,104 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,0,0,2.53299878168311,0.631719873426831,0.261185628199839,0.982935746006035,0.697801167972428,0.218441372130172,0.791300934685361,1.60896258848061,0.662794751455832,1.34465029290355,0,0,0,1.47745269692145,1.02000345622126,1.56727360739044,1.71741592278634,0.410623275218653,0.502170558379211,0.458480434487708,0.164201178899891,0.236132343941038,0.393364276848904,0,0,0,0,0,0,0.284338464974843,2.05520307534393,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.790152254325231,0.196709770113833,0,0.616804496998528,0,1.30368906653436,0,0,0,0,0.443067789167242,0,0,0,0.657751618414705,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,1.71813722741315,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0,0.802320587350522,0.434473211648397,9.75227465255847,8.71911117614727,3.70801429346238,0.361439152384566,1.00267582127178,3.0417768981773,0,0.973269740605272,2.45790524626576,3.1042115644759,2.0202000709419,2.61958150995425,0.364295288292542,0,1.29818957461873,0.696518949197069,2.12732736830184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673588117878509,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0.506522046658319,2.51577443545116,1.72101972449288,0.709336764396714,0,0,0.98667019366864,3.11211035399766,1.21239604862719,1.14423332179421,2.11900398702904,1.15235184896,0.468642863667593,1.24864030732128,0,0.149448680551801,0,0.161872944368132,0.280901613404497,0.408308342509787,0.368502951935304,0.206651562351531,1.18800285728205,0.989067717114227,6.37112953356618,4.31170885089743,0.336672227908132,0.875829639103749,0.277064115484183,1.31693286264251,0.612975591598039,0.150238058906597,2.04177929688038,0.89694817844431,1.06778694409284,0.635795703478686,1.20036438433761,0.103052529238439,3.09168648054755,0.558350568994769,0,0,3.02920529092937,1.19664868234989,1.61646056818812,2.13005755509969,0.302256294682921,0.169560592310488,0,0.272746120590835,0,5.48881677583179,3.71083351300159,3.71820617182459,2.59152637538426,1.00928340350251,3.28479623168247,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,6.5851841813024,2.94017422771084,13.9430538304014,18.6737171168749,18.9052770138049,0,0.983907508344908,1.02940686179115,0.109750285408626,0,0,1.20364978706088,1.95484983186195,1.03993478527958,1.44331342025273,3.13012093432707,0.469634776943287,0,0,0,0,0,0,9.36017060556951,2.82399208348584,0,0.16798212819886,0,0,0.290633938513962,0,1.47798971368783,5.63509977684647,0.207328115540772,1.44119953416961,1.13618190083742,2.28592419451809,1.14596527667483,4.68869788840188,0,0.514137463516618,2.40274446275134,1.42913216315289,0.224262168690721,0.87192013766656,0.22001485746285,1.68053230485111,14.3062578340753,2.535908257668,0.531876233169741,0,3.34369586540785,1.41849132023278,2.1313774321288,2.43062589218851,1.62786481617433,3.29296134712308,2.60588947434988,2.84313558994037,0.791951872933429,1.80863626235752,2.61460037580088,2.29937879718731,2.43247561282381,0,2.10833939483032,0,1.14861935834114,4.27910715122155,2.46128221334885,5.54786070886035,6.80431660311603,0.224170287987055,0,1.07813787429759,1.15508732651774,1.01637849688985,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,1.96306386750624,1.00034104211935,0.542530047399471,0.207970861530807,0.356857977594324,0,0,1.20378439891088,0,0,0,1.29058417979192,1.82455590382974,4.89502893656851,3.0882908142977,0,0,0,0.303127571446259,0,0.30239029332968,1.24053903909388,0.153461973288062,0.280660094433074,0.384417447767103,0,0.321707842287215,0,1.23367755042124,2.30830242907065,0.246381468041427,0.519254429183621,0.464841513839837,0.362578348774867,1.00253235151642,0,0.68888668898764,1.0925470080403,1.83574180943194,0,0.385076685522074,0,0,0.949964660035881,0,0,0,0,0.541892875087706,2.00675909541941,0,0,0.447749509444357,0,0,5.89835287767695,0,1.95227036798582,4.01859945426117,0,0,0,0,1.6068392984416,5.02687735119034,2.46477787383431,2.30255512089194,1.37836572484531,4.72649077420404,2.90033387828457,1.78975917573812,4.00644160410318,0.165284915360978,0,0.255225424989168,0,2.78907329578371,1.88887408098384,1.3940745403212,0.308033580176089,1.06461206063404,0,0,0.715624433709956,0.372158369359667,0.949138274156178,1.5250415513906,3.07077349573601,0,2.22742273548156,0,2.51821440616641,4.94166653524899,2.35624804691373,2.02182481573316,0,0.421258456238981,3.41343617362713,0.487426979262569,1.05650146756755,1.09199929126389,0,2.26016233240486,1.10273068709225,0,0.438450885253763,2.31510213706675,3.9353685122798,0.202910376962704,1.54911749049875,0.845086807596724,1.86434757865267,2.45622602532803,0.7133421029625,1.41904425628239,0,3.62224382255892,1.51789269506286,3.14941248220485,0.0962221127255121,0,0,3.20088922641049,0.86101074534246,0,1.33029046061003,0.9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| ||
|short_description=p1@SARDH | |short_description=p1@SARDH | ||
}} | }} |
Latest revision as of 07:43, 16 September 2015
Short description: | p1@SARDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SARDH_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000427237, ENST00000535281_5end |
EntrezGene: | SARDH |
HGNC: | 10536 |
UniProt: | Q5SYV1F5H3F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.57e-07 | 58 |
myoblast | 2.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.46e-10 | 86 |
neural plate | 2.31e-10 | 82 |
presumptive neural plate | 2.31e-10 | 82 |
nervous system | 3.35e-08 | 89 |
epithelium | 1.04e-07 | 306 |
central nervous system | 1.83e-07 | 81 |
cell layer | 2.51e-07 | 309 |
skeletal muscle tissue | 2.99e-07 | 62 |
striated muscle tissue | 2.99e-07 | 62 |
myotome | 2.99e-07 | 62 |
structure with developmental contribution from neural crest | 3.91e-07 | 132 |
pre-chordal neural plate | 5.19e-07 | 61 |
trunk mesenchyme | 6.64e-07 | 122 |
ecto-epithelium | 7.01e-07 | 104 |