FFCP PHASE1:Hg19::chr16:30390442..30390470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1731 | |EntrezGene=1731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2879 | |HGNC=2879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-380bp_to_uc002dxw.2_5end | |association_with_transcript=-380bp_to_uc002dxw.2_5end | ||
|cluster_id=chr16:30390442..30390470,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_3_at_SEPT1_5end | |description=CAGE_peak_3_at_SEPT1_5end | ||
|id=chr16:30390442..30390470,- | |id=chr16:30390442..30390470,- | ||
|ontology_enrichment_celltype=CL:0000542!5.34e-23!53;CL:0000051!5.34e-23!53;CL:0000838!1.70e-22!52;CL:0000791!4.09e-18!18;CL:0000789!4.09e-18!18;CL:0002420!4.09e-18!18;CL:0002419!4.09e-18!18;CL:0000790!4.09e-18!18;CL:0000084!1.84e-16!25;CL:0000827!1.84e-16!25;CL:0000738!1.90e-16!140;CL:0002087!3.25e-14!119;CL:0000625!6.19e-12!11;CL:0002031!7.67e-11!124;CL:0000037!3.67e-10!172;CL:0000566!3.67e-10!172;CL:0000988!1.83e-08!182;CL:0002032!4.74e-08!165;CL:0000837!4.74e-08!165;CL:0000624!8.43e-08!6 | |ontology_enrichment_celltype=CL:0000542!5.34e-23!53;CL:0000051!5.34e-23!53;CL:0000838!1.70e-22!52;CL:0000791!4.09e-18!18;CL:0000789!4.09e-18!18;CL:0002420!4.09e-18!18;CL:0002419!4.09e-18!18;CL:0000790!4.09e-18!18;CL:0000084!1.84e-16!25;CL:0000827!1.84e-16!25;CL:0000738!1.90e-16!140;CL:0002087!3.25e-14!119;CL:0000625!6.19e-12!11;CL:0002031!7.67e-11!124;CL:0000037!3.67e-10!172;CL:0000566!3.67e-10!172;CL:0000988!1.83e-08!182;CL:0002032!4.74e-08!165;CL:0000837!4.74e-08!165;CL:0000624!8.43e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.14e-37;18!CL:0000789;1.14e-37;18!CL:0002419;1.14e-37;18!CL:0000084;1.22e-28;25!CL:0000625;9.98e-26;11!CL:0000542;2.73e-20;53!CL:0000624;4.44e-16;6!CL:0000094;1.27e-12;8!CL:0000236;1.67e-12;13!CL:0000898;6.34e-09;3!CL:0000081;6.90e-09;11!CL:0000226;2.56e-08;3!CL:0000842;2.56e-08;3!CL:0000623;3.37e-08;3!CL:0000767;3.43e-07;3!CL:0000784;5.32e-07;3!CL:0002087;8.25e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.19e-37,18;CL:0000789,1.19e-37,18;CL:0002420,1.19e-37,18;CL:0002419,1.19e-37,18;CL:0000790,1.19e-37,18;CL:0000838,2.70e-34,52;CL:0000542,1.78e-33,53;CL:0000051,1.78e-33,53;CL:0000084,1.42e-28,25;CL:0000827,1.42e-28,25;CL:0000625,1.05e-25,11;CL:0000738,1.64e-25,136;CL:0002087,1.54e-19,115;CL:0000037,3.09e-18,168;CL:0000988,1.12e-16,177;CL:0000624,4.45e-16,6;CL:0002031,1.24e-14,120;CL:0002032,2.56e-14,161;CL:0000837,2.56e-14,161;CL:0000094,1.11e-12,8;CL:0000236,1.38e-11,14;CL:0000081,6.29e-09,11;CL:0000898,6.34e-09,3;CL:0000226,2.53e-08,3;CL:0000842,2.53e-08,3;CL:0000623,3.54e-08,3;CL:0000825,3.54e-08,3;CL:0000767,3.04e-07,3;CL:0000784,5.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.14e-37;18!CL:0000051;2.73e-20;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.95e-13!115;UBERON:0000178!9.42e-09!15;UBERON:0000179!9.42e-09!15;UBERON:0000463!9.42e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!6.95e-13!115;UBERON:0000178!9.42e-09!15;UBERON:0000179!9.42e-09!15;UBERON:0000463!9.42e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.71e-20;15!UBERON:0000179;2.71e-20;15!UBERON:0000463;2.71e-20;15!UBERON:0002390;1.54e-11;32!UBERON:0002193;9.07e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.13e-20,15;UBERON:0000179,3.13e-20,15;UBERON:0000463,3.13e-20,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.393553906568396,3.54027849164014,4.98978217526377,2.47705797305722,0.919421224478927,0,0,0,0.142169232487422,0.587200878669695,2.76997704265939,4.8130667392834,5.64228263861215,0.223915474239924,0.971680998056939,0,0,0,0,0.232429036905685,0.822335776043652,0,0.575384784644301,0,0,0,0.645484683583826,0,0,0,0,0,1.28371610830437,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,2.66852776159066,3.84057200309856,3.60356388332411,2.29900975981793,1.32208974556972,0,18.7840279806118,24.6639619535794,28.2882188812669,2.64342657158052,5.60508562981536,0,31.6702729883271,50.3053776318931,34.335450332918,9.1952572464873,73.984354525825,50.6589152136165,31.1722765452658,1.89397776704795,38.5933738792037,28.1348046121199,13.8109970520158,2.68991771423918,3.51160238411671,2.13769275984779,2.21080014228679,5.506258628966,42.1133839380252,33.1750626831244,20.9071047609954,3.28597093822942,36.4059468921825,24.0539211837841,12.1449452169361,10.1940932583711,13.6727525309848,10.4549724889321,13.7023358360773,11.00684855928,13.742379920758,14.680189626729,10.6746639599736,25.2008429030916,25.9416989910002,23.4615534290134,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0,3.33886874027479,2.28797964312051,2.22874500797739,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,13.595122453933,18.328343863059,10.6524720112191,0,0,0,0.335032530668698,0.637938751653163,1.49801404789436,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1955862988141,13.8057088523915,15.368768323696,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.362578348774867,0.40101294060657,0.184161977871793,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0,0,4.56702848308952,5.35246044999663,5.12682468456746,6.67048971281809,5.34770955012053,3.24236655596359,9.18053443304795,8.72437693923697,0.106824071127473,0,0,0.371606350251437,0,0.640276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,2.48655523978033,0.251932747854276,0,0.123084805461069,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0.174919999992391,0,0.1137934482855,0,0.709163045303809,0.344743373241465,0,0,0.885741385813839,2.05013945663194,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0,0,0.269272933229316,0.434589487688032,0.31900115973192,0.0915975934018623,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0.525774708558629,0,0.229160424011684,1.43574604915363,0,0.429226048136571,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0,0,0.0607495566580247,0.670869375198532,0.236417121897595,0.104909176269996,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0.320362237703084,0,0,6.45015828355536,0,0.852548188666271,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.434674820589684,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.963438376446893,0,0.159633859057151,0,0,0.622415272177961,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0.230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| ||
|short_description=p3@SEPT1 | |short_description=p3@SEPT1 | ||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p3@SEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEPT1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -380bp_to_uc002dxw.2_5end |
EntrezGene: | SEPT1 |
HGNC: | 2879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.19e-37 | 18 |
alpha-beta T cell | 1.19e-37 | 18 |
immature T cell | 1.19e-37 | 18 |
mature T cell | 1.19e-37 | 18 |
immature alpha-beta T cell | 1.19e-37 | 18 |
lymphoid lineage restricted progenitor cell | 2.70e-34 | 52 |
lymphocyte | 1.78e-33 | 53 |
common lymphoid progenitor | 1.78e-33 | 53 |
T cell | 1.42e-28 | 25 |
pro-T cell | 1.42e-28 | 25 |
CD8-positive, alpha-beta T cell | 1.05e-25 | 11 |
leukocyte | 1.64e-25 | 136 |
nongranular leukocyte | 1.54e-19 | 115 |
hematopoietic stem cell | 3.09e-18 | 168 |
hematopoietic cell | 1.12e-16 | 177 |
CD4-positive, alpha-beta T cell | 4.45e-16 | 6 |
hematopoietic lineage restricted progenitor cell | 1.24e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.56e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-14 | 161 |
granulocyte | 1.11e-12 | 8 |
B cell | 1.38e-11 | 14 |
blood cell | 6.29e-09 | 11 |
naive T cell | 6.34e-09 | 3 |
single nucleate cell | 2.53e-08 | 3 |
mononuclear cell | 2.53e-08 | 3 |
natural killer cell | 3.54e-08 | 3 |
pro-NK cell | 3.54e-08 | 3 |
basophil | 3.04e-07 | 3 |
plasmacytoid dendritic cell | 5.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.13e-20 | 15 |
haemolymphatic fluid | 3.13e-20 | 15 |
organism substance | 3.13e-20 | 15 |