FFCP PHASE1:Hg19::chr9:136343729..136343751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11182 | |EntrezGene=11182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11011 | |HGNC=11011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=466bp_to_ENST00000485978_5end | |association_with_transcript=466bp_to_ENST00000485978_5end | ||
|cluster_id=chr9:136343729..136343751,- | |||
|coexpression_cluster_id=C2175 | |||
|description=CAGE_peak_4_at_SLC2A6_5end | |description=CAGE_peak_4_at_SLC2A6_5end | ||
|id=chr9:136343729..136343751,- | |id=chr9:136343729..136343751,- | ||
|ontology_enrichment_celltype=CL:0000766!1.53e-46!76;CL:0000839!2.47e-46!70;CL:0002057!1.04e-45!42;CL:0002194!1.05e-45!63;CL:0000576!1.05e-45!63;CL:0000040!1.05e-45!63;CL:0000559!1.05e-45!63;CL:0000557!2.26e-45!71;CL:0000860!5.25e-45!45;CL:0000738!2.26e-44!140;CL:0002009!1.14e-43!65;CL:0002087!3.52e-42!119;CL:0002031!2.34e-39!124;CL:0000988!3.60e-32!182;CL:0000037!2.04e-31!172;CL:0000566!2.04e-31!172;CL:0002032!1.07e-29!165;CL:0000837!1.07e-29!165;CL:0000763!1.20e-27!112;CL:0000049!1.20e-27!112;CL:0002393!1.82e-12!9;CL:0002397!1.82e-12!9;CL:0000048!6.89e-12!430;CL:0000034!2.39e-11!444;CL:0000723!2.95e-11!436;CL:0000134!7.64e-11!358;CL:0000144!1.99e-10!625;CL:0002320!4.33e-10!365;CL:0002371!4.50e-10!591;CL:0000945!4.77e-10!24;CL:0000826!4.77e-10!24;CL:0000219!3.04e-09!390;CL:0000012!1.09e-08!682;CL:0000548!2.17e-08!679;CL:0000004!2.17e-08!679;CL:0000255!2.17e-08!679;CL:0000236!4.03e-08!14;CL:0000063!4.63e-07!578;CL:0000080!5.98e-07!6 | |ontology_enrichment_celltype=CL:0000766!1.53e-46!76;CL:0000839!2.47e-46!70;CL:0002057!1.04e-45!42;CL:0002194!1.05e-45!63;CL:0000576!1.05e-45!63;CL:0000040!1.05e-45!63;CL:0000559!1.05e-45!63;CL:0000557!2.26e-45!71;CL:0000860!5.25e-45!45;CL:0000738!2.26e-44!140;CL:0002009!1.14e-43!65;CL:0002087!3.52e-42!119;CL:0002031!2.34e-39!124;CL:0000988!3.60e-32!182;CL:0000037!2.04e-31!172;CL:0000566!2.04e-31!172;CL:0002032!1.07e-29!165;CL:0000837!1.07e-29!165;CL:0000763!1.20e-27!112;CL:0000049!1.20e-27!112;CL:0002393!1.82e-12!9;CL:0002397!1.82e-12!9;CL:0000048!6.89e-12!430;CL:0000034!2.39e-11!444;CL:0000723!2.95e-11!436;CL:0000134!7.64e-11!358;CL:0000144!1.99e-10!625;CL:0002320!4.33e-10!365;CL:0002371!4.50e-10!591;CL:0000945!4.77e-10!24;CL:0000826!4.77e-10!24;CL:0000219!3.04e-09!390;CL:0000012!1.09e-08!682;CL:0000548!2.17e-08!679;CL:0000004!2.17e-08!679;CL:0000255!2.17e-08!679;CL:0000236!4.03e-08!14;CL:0000063!4.63e-07!578;CL:0000080!5.98e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-53;33!CL:0002057;1.54e-53;33!CL:0000576;9.28e-47;48!CL:0000473;1.01e-45;39!CL:0000234;1.01e-45;39!CL:0000766;8.93e-34;69!CL:0002393;1.42e-23;6!CL:0002397;1.42e-23;6!CL:0002087;2.99e-17;104!CL:0000763;1.12e-14;100!CL:0000875;1.25e-13;3!CL:0002396;1.25e-13;3!CL:0000738;6.17e-12;136!CL:0000988;5.04e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.01e-94,48;CL:0000234,6.01e-94,48;CL:0000860,2.81e-90,42;CL:0002057,2.81e-90,42;CL:0002194,1.77e-73,59;CL:0000576,1.77e-73,59;CL:0000040,1.77e-73,59;CL:0000559,1.77e-73,59;CL:0002009,7.77e-71,61;CL:0000766,2.81e-66,72;CL:0000839,6.38e-65,66;CL:0000557,7.64e-64,67;CL:0002087,2.37e-48,115;CL:0000738,4.45e-44,136;CL:0000763,1.66e-41,108;CL:0000049,1.66e-41,108;CL:0002031,4.20e-41,120;CL:0002393,1.35e-35,9;CL:0002397,1.35e-35,9;CL:0000037,6.21e-34,168;CL:0000988,1.60e-33,177;CL:0002032,5.15e-32,161;CL:0000837,5.15e-32,161;CL:0000134,8.49e-15,354;CL:0002320,2.57e-14,361;CL:0000875,1.21e-13,3;CL:0002396,1.21e-13,3;CL:0000219,1.27e-12,386;CL:0000034,2.32e-12,441;CL:0000048,3.15e-12,427;CL:0000723,6.46e-12,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.07e-62;42!CL:0000049;2.12e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.74e-39!102;UBERON:0003061!4.74e-39!102;UBERON:0002193!1.77e-38!112;UBERON:0002371!7.78e-38!80;UBERON:0001474!1.04e-33!86;UBERON:0002405!2.64e-31!115;UBERON:0003081!1.81e-30!216;UBERON:0004765!1.38e-26!101;UBERON:0001434!1.38e-26!101;UBERON:0002204!3.24e-19!167;UBERON:0002384!3.07e-10!375;UBERON:0000926!2.15e-07!448;UBERON:0004120!2.15e-07!448;UBERON:0006603!2.15e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.14e-55,76;UBERON:0001474,8.78e-51,82;UBERON:0002390,2.56e-49,98;UBERON:0003061,2.56e-49,98;UBERON:0004765,1.41e-45,90;UBERON:0002193,5.58e-44,108;UBERON:0002405,7.45e-44,93;UBERON:0001434,3.13e-40,100;UBERON:0003081,1.37e-26,203;UBERON:0002204,6.08e-24,167;UBERON:0000926,8.60e-15,315;UBERON:0004120,8.60e-15,315;UBERON:0006603,8.60e-15,315;UBERON:0002384,1.16e-13,371 | |||
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|short_description=p4@SLC2A6 | |short_description=p4@SLC2A6 | ||
}} | }} |
Latest revision as of 07:21, 16 September 2015
Short description: | p4@SLC2A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC2A6_5end |
Coexpression cluster: | C2175_CD14_CD14CD16_splenic_migratory_Peripheral_Basophils_Whole |
Association with transcript: | 466bp_to_ENST00000485978_5end |
EntrezGene: | SLC2A6 |
HGNC: | 11011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.14e-55 | 76 |
bone element | 8.78e-51 | 82 |
hematopoietic system | 2.56e-49 | 98 |
blood island | 2.56e-49 | 98 |
skeletal element | 1.41e-45 | 90 |
hemolymphoid system | 5.58e-44 | 108 |
immune system | 7.45e-44 | 93 |
skeletal system | 3.13e-40 | 100 |
lateral plate mesoderm | 1.37e-26 | 203 |
musculoskeletal system | 6.08e-24 | 167 |
mesoderm | 8.60e-15 | 315 |
mesoderm-derived structure | 8.60e-15 | 315 |
presumptive mesoderm | 8.60e-15 | 315 |
connective tissue | 1.16e-13 | 371 |