FFCP PHASE1:Hg19::chr1:115212696..115212716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163259 | |EntrezGene=163259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24748 | |HGNC=24748 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPG4,Q68D51 | |UniProt=C9JPG4,Q68D51 | ||
|association_with_transcript=15bp_to_ENST00000393276,ENST00000393277,NM_198459,uc001efc.1,uc001efd.1_5end | |association_with_transcript=15bp_to_ENST00000393276,ENST00000393277,NM_198459,uc001efc.1,uc001efd.1_5end | ||
|cluster_id=chr1:115212696..115212716,- | |||
|description=CAGE_peak_3_at_DENND2C_5end | |description=CAGE_peak_3_at_DENND2C_5end | ||
|id=chr1:115212696..115212716,- | |id=chr1:115212696..115212716,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.65e-10;1!UBERON:0009143;1.25e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.25e-09;1!DOID:3149;1.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.46e-09,1;DOID:3149,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.23e-07!659 | |ontology_enrichment_uberon=UBERON:0000468!2.23e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.23e-18;2!UBERON:0000941;4.65e-10;1!UBERON:0001785;4.65e-10;1!UBERON:0002464;4.65e-10;1!UBERON:0004904;4.65e-10;1!UBERON:0002426;4.65e-10;1!UBERON:0003831;4.65e-10;1!UBERON:0003898;4.65e-10;1!UBERON:0004830;4.65e-10;1!UBERON:0001021;4.65e-10;1!UBERON:0003830;4.65e-10;1!UBERON:0005175;4.65e-10;1!UBERON:0001774;4.65e-10;1!UBERON:0001103;4.65e-10;1!UBERON:0007029;1.25e-09;1!UBERON:0007195;1.25e-09;1!UBERON:0000014;3.16e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.24e-18,2;UBERON:0000941,4.09e-10,1;UBERON:0001785,4.09e-10,1;UBERON:0002464,4.09e-10,1;UBERON:0004904,4.09e-10,1;UBERON:0001021,4.09e-10,1;UBERON:0003902,4.09e-10,1;UBERON:0005425,4.09e-10,1;UBERON:0002426,4.46e-10,1;UBERON:0003831,4.46e-10,1;UBERON:0003898,4.46e-10,1;UBERON:0004830,4.46e-10,1;UBERON:0003830,4.46e-10,1;UBERON:0005175,4.46e-10,1;UBERON:0001774,4.46e-10,1;UBERON:0001103,4.46e-10,1;UBERON:0010084,4.46e-10,1;UBERON:0007029,9.70e-10,1;UBERON:0007195,1.48e-09,1;UBERON:0000014,3.89e-09,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0,0,0,0,0.80642697289893,0.534880391567015,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,1.45990461090791,0.283604451492204,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,0,0,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0.250237039743928,0.554128230968366,0.438977620880838,0,0,0,0.538168907066586,0.427114777637135,0.847727604638247,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.506328996723799,0.389748020644795,0.252433774244115,0.368199594569197,0.323292113637624,0,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.286804595389004,0.121973706129595,0.265059536642971,0,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0.588664395376038,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.439001141634502,0,0.502644862058154,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0.567100388969546,0.626909658919938,0,0,0,0.44024217006613,0.207328115540772,0.576479813667846,1.00993946741104,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.716243852959582,0,0,0.431255149719035,0,0,0,0,0.335032530668698,0,0,0,0.414415513436035,0.613457458595699,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0.710246901252508,0.492762936082855,0,0.232420756919918,0,0.200506470303285,0.828728900423067,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.247528499761764,0,0,0,0.290012154876366,0,0.15350367472613,0.275673144969061,0.429680979473094,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.960950336825531,0.765676274967505,0.10115778085555,0.464845549297286,3.1481234683064,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0.35667105148125,0,0.211107635297664,0.987884678879706,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,1.57768678274367,0,0.284136146806413,0.47748896947538,0.296964680832639,1.53580351049616,0,0,0,0.16480387422676,0,0.796991953004279,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.591860433821602,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0.583209226766509,0,0,0.844175070377856,0,0.221158519862449,0,0.219385397153973,0,0.278847488557207,1.00035336054936,0.227884111694002,0,0,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,2.40773294189637,0.234264445725339,0,0.391329237864179,0.242780379534093,0,1.20990716048664,0.61214552326098,0.31593289814244,0,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.522355239482415,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.0821154570532092,1.45483524732629,0,1.35588444468319,0,0,0.189932387867636,0,0.0801588202515337,0.426905989478705,0,0,0.229073192331831,0,0,0,0.235694034616795,0.407712618220842,0.104602846312333,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0.2249738915515,0.77380195455795,0.0607495566580247,1.0063040627978,0.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| ||
|short_description=p3@DENND2C | |short_description=p3@DENND2C | ||
}} | }} |
Latest revision as of 07:16, 16 September 2015
Short description: | p3@DENND2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DENND2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000393276, ENST00000393277, NM_198459, uc001efc.1, uc001efd.1_5end |
EntrezGene: | DENND2C |
HGNC: | 24748 |
UniProt: | C9JPG4Q68D51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.24e-18 | 2 |
cranial nerve II | 4.09e-10 | 1 |
cranial nerve | 4.09e-10 | 1 |
nerve trunk | 4.09e-10 | 1 |
nerve connecting eye with brain | 4.09e-10 | 1 |
nerve | 4.09e-10 | 1 |
retinal neural layer | 4.09e-10 | 1 |
presumptive neural retina | 4.09e-10 | 1 |
chest muscle | 4.46e-10 | 1 |
respiratory system muscle | 4.46e-10 | 1 |
skeletal muscle of trunk | 4.46e-10 | 1 |
respiratory system skeletal muscle | 4.46e-10 | 1 |
thoracic segment muscle | 4.46e-10 | 1 |
chest organ | 4.46e-10 | 1 |
muscle of trunk | 4.46e-10 | 1 |
diaphragm | 4.46e-10 | 1 |
future diaphragm | 4.46e-10 | 1 |
surface | 9.70e-10 | 1 |
stroma of bone marrow | 1.48e-09 | 1 |
zone of skin | 3.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.46e-09 | 1 |
keratoacanthoma | 2.46e-09 | 1 |