FFCP PHASE1:Hg19::chr17:53499179..53499208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23531 | |EntrezGene=23531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7153 | |HGNC=7153 | ||
|TSSclassifier=strong | |||
|UniProt=Q15546 | |UniProt=Q15546 | ||
|association_with_transcript=132bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | |association_with_transcript=132bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | ||
|cluster_id=chr17:53499179..53499208,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_MMD_5end | |description=CAGE_peak_2_at_MMD_5end | ||
|id=chr17:53499179..53499208,- | |id=chr17:53499179..53499208,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.11e-08;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-10!115;UBERON:0000481!3.79e-08!347;UBERON:0005256!4.33e-08!143;UBERON:0000119!4.13e-07!312;UBERON:0003929!4.33e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;3.70e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.65e-09,114;UBERON:0003104,1.11e-08,160;UBERON:0009142,1.11e-08,160;UBERON:0011216,1.13e-08,223;UBERON:0005256,1.45e-08,122;UBERON:0009856,3.74e-07,26;UBERON:0009497,4.47e-07,25;UBERON:0000015,4.47e-07,25;UBERON:0002423,4.47e-07,25;UBERON:0006235,4.47e-07,25;UBERON:0004161,4.47e-07,25;UBERON:0003929,6.31e-07,54;UBERON:0007499,8.26e-07,25 | |||
|phase1_expression=6.90377841228115,27.4048670580458,16.6326196833246,11.0080628188443,25.0298212879281,0,15.1979926900986,25.2687949370732,23.2455209097856,11.0580271425679,2.79120467188971,0,0.263766978228454,30.5702891811315,29.4943664397845,3.36162573225888,2.41077811209591,2.19093027116212,0.975865597581014,1.84681587115182,0.816002764977012,0.626909442956176,0,0.547497700291537,0.87879847716362,1.83392173795083,2.54511827294832,1.49550484495991,9.4407426443737,1.53531759238885,1.08371286321253,0,0,0,0.697204805222715,2.13253848731132,0.293600439334847,2.76997704265939,1.80490002723128,2.38711957787437,9.85228086655667,13.6035339727971,7.46969146139141,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,0,0,0.797854630486527,0,0.290209238628584,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0.605399502633369,1.10483290796269,0.949387162322653,0.845021145247767,0.850417199860174,0.419317291016752,0.561643155732475,0.300353785683013,0.16072558669708,0.855038231223746,0.19891667719909,0.730656615058536,0,1.09227722252426,0,0.853460445133014,1.20118796110804,0,0.661044872784862,0.954053754535364,3.41527781465669,4.69789751496751,4.58727873750275,1.32171328579026,1.68152568894461,0.790152254325231,0.196709770113833,0.786021525498329,0,1.5046784585161,0,0,0,1.55974639639243,0,0.443067789167242,0.541607727530031,0.640456598628376,0.910415432919148,3.28875809207352,4.42160028457357,2.89803085735052,0.14828656316206,0,0,1.35971211237079,0.383220493601921,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,1.20964045934839,0.267440195783507,0.289648807765598,31.694892620815,88.53251348088,3.45228916977532,1.0843174571537,0,0.869079113764942,0,0,0.283604451492204,0.221729397462564,0.790513071238134,3.66741411393595,0,0,4.86821090482025,4.52737316978095,2.79211717089617,0.238490624305342,1.14398982156026,0.371457501329565,0,0.860234595106124,0.694281003215189,0,0,0.275118041940067,0,0.258416759169329,2.13459757612026,1.67360306382335,1.61131726843659,2.28081631715554,3.1728067481262,0.367663080345869,0,0.535798369704479,0.44905874525234,0.450445921933289,0,0,1.09921046358244,0,3.87780264148325,0,0,0.759783069987479,0,0.286836620748814,2.4826786753885,1.68203280042692,2.1349799145941,0.24666754841716,12.7596524513904,5.52313755485721,13.7307998615305,12.1085942115945,13.25204626304,0.70296429550139,8.74048215124897,1.1409436430889,6.72519062483105,1.40921398372518,1.29498355494505,1.12360645361799,18.3738754129404,5.52754427902956,20.7684820163289,2.37600571456411,0.494533858557114,1.82032272387605,6.46756327634615,1.34668891163253,3.62843707628696,3.04770527032601,0.877955241761676,0.612975591598039,1.50238058906597,4.42385514324082,0.358779271377724,0.213557388818567,0.211931901159562,0,0.824420233907511,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.847802961552438,0.773043412653187,0.545492241181669,0.573609190778008,2.19552671033272,1.85541675650079,2.44007280025989,4.97573064073778,2.27088765788066,1.82488679537915,1.56449532329816,0.643240938192885,0,3.71494342425583,5.0531563716871,0.118306800039844,0,0.723033089650446,0.441175890929576,0,0,0.269662616320329,0.392442930250692,0.38474715694639,3.69077727312324,2.80483547606892,26.3407367252096,2.94017422771084,1.26755034821831,17.6908899001973,0.590789906681404,0,40.7091731577706,22.8185187697039,0.439001141634502,0,0.100528972411631,0,0,8.31947828223663,2.88662684050547,1.507095264676,2.7003999674239,2.30986316417718,1.85194205030644,2.66355813128438,0,0,4.18568910348575,3.51006397708857,3.86441021950693,0,0.335964256397719,0.425325291727159,0.806026704325635,0,0.383382679165211,2.46331618947972,0,0,0,0,2.60341366597893,0.381988425558278,1.17217447210047,5.13217338068116,0.719792448923265,0.901029173531752,0.857479297891735,8.07343807286597,19.1822430286643,6.0137394373179,0.129271715757778,14.3062578340753,3.381211010224,0.26593811658487,1.04007436911366,6.94459910507784,0,7.72624319146688,18.8730951628755,1.08524321078289,0.823240336780769,2.28015329005615,16.7034215908997,15.0470855857352,103.695145708498,166.462890592656,91.2753409492181,6.08118903205952,18.5835123829887,12.6500363689819,0,0,0,1.88215698667853,21.985966512891,10.0274139414342,1.45710687191585,2.95546140302891,1.2937654491571,1.92514554419623,2.7950408664471,7.8083912314573,0.773288812777695,1.50764638800914,2.55175500661265,0.749007023947182,2.99161459204025,1.24324654030811,31.7770963552572,17.005797716029,12.4781910901878,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,5.17365356462525,0,0.737476674166813,1.47702144595741,1.95801157462741,2.40200396667599,2.27444828735176,1.72571360654893,1.60091336705167,0.606255142892519,0,0.30239029332968,0,0,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0.925258162815933,1.9531789784444,1.88892458831761,0.519254429183621,2.32420756919918,44.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| ||
|short_description=p2@MMD | |short_description=p2@MMD | ||
}} | }} |
Latest revision as of 07:07, 16 September 2015
Short description: | p2@MMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 132bp_to_ENST00000262065, NM_012329, uc002iui.2_5end |
EntrezGene: | MMD |
HGNC: | 7153 |
UniProt: | Q15546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.65e-09 | 114 |
mesenchyme | 1.11e-08 | 160 |
entire embryonic mesenchyme | 1.11e-08 | 160 |
organ system subdivision | 1.13e-08 | 223 |
trunk mesenchyme | 1.45e-08 | 122 |
sac | 3.74e-07 | 26 |
epithelium of foregut-midgut junction | 4.47e-07 | 25 |
anatomical boundary | 4.47e-07 | 25 |
hepatobiliary system | 4.47e-07 | 25 |
foregut-midgut junction | 4.47e-07 | 25 |
septum transversum | 4.47e-07 | 25 |
gut epithelium | 6.31e-07 | 54 |
epithelial sac | 8.26e-07 | 25 |