FFCP PHASE1:Hg19::chr3:156871560..156871581,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57018 | |EntrezGene=57018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20569 | |HGNC=20569 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000474539_5end | |association_with_transcript=35bp_to_ENST00000474539_5end | ||
|cluster_id=chr3:156871560..156871581,- | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_8_at_CCNL1_5end | |description=CAGE_peak_8_at_CCNL1_5end | ||
|id=chr3:156871560..156871581,- | |id=chr3:156871560..156871581,- | ||
|ontology_enrichment_celltype=CL:0000738!1.15e-25!140;CL:0000037!5.87e-24!172;CL:0000566!5.87e-24!172;CL:0002087!1.72e-23!119;CL:0002031!1.37e-22!124;CL:0002032!1.03e-21!165;CL:0000837!1.03e-21!165;CL:0000988!1.18e-21!182;CL:0002057!2.95e-17!42;CL:0000860!4.60e-16!45;CL:0000766!3.28e-12!76;CL:0002009!8.01e-12!65;CL:0000557!3.69e-11!71;CL:0000542!3.91e-11!53;CL:0000051!3.91e-11!53;CL:0000838!4.12e-11!52;CL:0000763!4.22e-11!112;CL:0000049!4.22e-11!112;CL:0000839!4.86e-11!70;CL:0002194!5.18e-11!63;CL:0000576!5.18e-11!63;CL:0000040!5.18e-11!63;CL:0000559!5.18e-11!63;CL:0000134!1.33e-09!358;CL:0000219!4.02e-09!390;CL:0002320!9.76e-09!365;CL:0000084!3.02e-08!25;CL:0000827!3.02e-08!25;CL:0000791!1.34e-07!18;CL:0000789!1.34e-07!18;CL:0002420!1.34e-07!18;CL:0002419!1.34e-07!18;CL:0000790!1.34e-07!18;CL:0002393!6.61e-07!9;CL:0002397!6.61e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.15e-25!140;CL:0000037!5.87e-24!172;CL:0000566!5.87e-24!172;CL:0002087!1.72e-23!119;CL:0002031!1.37e-22!124;CL:0002032!1.03e-21!165;CL:0000837!1.03e-21!165;CL:0000988!1.18e-21!182;CL:0002057!2.95e-17!42;CL:0000860!4.60e-16!45;CL:0000766!3.28e-12!76;CL:0002009!8.01e-12!65;CL:0000557!3.69e-11!71;CL:0000542!3.91e-11!53;CL:0000051!3.91e-11!53;CL:0000838!4.12e-11!52;CL:0000763!4.22e-11!112;CL:0000049!4.22e-11!112;CL:0000839!4.86e-11!70;CL:0002194!5.18e-11!63;CL:0000576!5.18e-11!63;CL:0000040!5.18e-11!63;CL:0000559!5.18e-11!63;CL:0000134!1.33e-09!358;CL:0000219!4.02e-09!390;CL:0002320!9.76e-09!365;CL:0000084!3.02e-08!25;CL:0000827!3.02e-08!25;CL:0000791!1.34e-07!18;CL:0000789!1.34e-07!18;CL:0002420!1.34e-07!18;CL:0002419!1.34e-07!18;CL:0000790!1.34e-07!18;CL:0002393!6.61e-07!9;CL:0002397!6.61e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.77e-17;18!CL:0000789;3.77e-17;18!CL:0002419;3.77e-17;18!CL:0000624;1.58e-16;6!CL:0000084;8.25e-14;25!CL:0000542;1.54e-10;53!CL:0000623;4.16e-10;3!CL:0000226;1.33e-09;3!CL:0000842;1.33e-09;3!CL:0002087;1.41e-08;104!CL:0000898;2.30e-08;3!CL:0002393;1.16e-07;6!CL:0002397;1.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.46e-28,115;CL:0000738,1.79e-28,136;CL:0002031,1.65e-23,120;CL:0000037,3.33e-22,168;CL:0000988,1.74e-20,177;CL:0002032,1.23e-19,161;CL:0000837,1.23e-19,161;CL:0000791,1.90e-17,18;CL:0000789,1.90e-17,18;CL:0002420,1.90e-17,18;CL:0002419,1.90e-17,18;CL:0000790,1.90e-17,18;CL:0000838,3.09e-17,52;CL:0000624,5.26e-17,6;CL:0000542,8.29e-17,53;CL:0000051,8.29e-17,53;CL:0000084,6.14e-14,25;CL:0000827,6.14e-14,25;CL:0000134,2.53e-13,354;CL:0002320,8.55e-13,361;CL:0000219,6.16e-11,386;CL:0000766,7.51e-11,72;CL:0000860,8.03e-11,42;CL:0002057,8.03e-11,42;CL:0000473,1.70e-10,48;CL:0000234,1.70e-10,48;CL:0000034,2.16e-10,441;CL:0002393,2.48e-10,9;CL:0002397,2.48e-10,9;CL:0000623,4.45e-10,3;CL:0000825,4.45e-10,3;CL:0000048,6.22e-10,427;CL:0000723,1.34e-09,433;CL:0000226,1.50e-09,3;CL:0000842,1.50e-09,3;CL:0002194,8.11e-09,59;CL:0000576,8.11e-09,59;CL:0000040,8.11e-09,59;CL:0000559,8.11e-09,59;CL:0000898,9.36e-09,3;CL:0000839,1.58e-08,66;CL:0002009,2.09e-08,61;CL:0000557,2.42e-08,67 | |||
|ontology_enrichment_development_v019=CL:0000790;3.77e-17;18!CL:0000051;1.54e-10;53!CL:0002057;1.51e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-11!102;UBERON:0003061!2.08e-11!102;UBERON:0002371!1.20e-10!80;UBERON:0002193!2.40e-10!112;UBERON:0001474!5.03e-10!86;UBERON:0002384!1.65e-08!375;UBERON:0002405!2.65e-08!115;UBERON:0004765!1.61e-07!101;UBERON:0001434!1.61e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.49e-12,371;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0001474,6.11e-08,82;UBERON:0002371,7.64e-08,76;UBERON:0002193,2.56e-07,108;UBERON:0004765,7.57e-07,90 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0.873765488520689,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.154934401160603,0.284338464974843,0.587200878669695,0.553995408531877,2.00544447470142,4.99125002646459,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.464858073811369,1.23350366406548,1.54853185447552,0.863077176966451,0.768482119587302,1.18241114944293,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,2.44867113896722,0.320929027076094,0.639337125799041,0,1.19678194572979,2.13112375266347,2.03146467040009,0.56738522469114,0.622822248995575,0.75374599577023,2.08593167368081,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0.845021145247767,1.91343869968539,1.04829322754188,0.673971786878971,1.50176892841506,0.803627933485401,1.14005097496499,1.59133341759272,0.91332076882317,1.75996244461323,0,0.889509253863555,1.70692089026603,0,0,0.661044872784862,0,6.83055562931338,3.52342313622563,3.44045905312706,1.32171328579026,1.12101712596307,0.263384084775077,3.93419540227666,9.03924754323079,2.46721798799411,0.334372990781356,1.62961133316795,1.4203434172042,0,0.334231370655521,1.47302953737419,0.886135578334485,0.541607727530031,0.25618263945135,0.520237390239513,0,0.552700035571697,0.289803085735052,1.63115219478266,1.87278579662799,2.09071047609954,0.339928028092699,1.91610246800961,2.40539211837841,2.02415753615602,0.318565414324097,1.30216690771284,0,0.301150238155546,0.511946444617674,2.49861453104692,0.236777252044017,0,4.43534835094411,7.48832548193821,4.63438092424957,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.263504357079378,0.130979075497713,0,0,0,0.348259474598534,0,1.66943437013739,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0.496971951695318,0.25326102332916,1.58891016975863,1.72101972449288,0,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,1.61450672119976,0.213557388818567,0,0.600182192168805,0,2.06112432036503,0.37223371266318,0.168776332241266,0,1.00973509697646,0,0,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0,0.265059536642971,0,0.10366105501537,0,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,2.94848165003288,0.590789906681404,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0,1.29707958075265,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,5.91092280605782,3.01878604803324,5.64709359630893,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,2.06768026122887,3.8828556147351,2.13455115606889,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.614014698904518,0.275673144969061,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,1.05553817648832,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.284567373393656,0.318852545457645,0.399158742865633,0.191505370132367,0.635020748171649,0.324621940274555,0,0.912938716132769,0.313359791546046,2.50634477090067,0,0.481764225311099,0.80719882876419,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0.242721043499027,0.334330152832435,0,0.23874448473769,0,0,0,0.140669416410513,0.445234820091624,0,0.422250816255987,0.398495976502139,0,0,0.20453736500431,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0.331737779793674,0,0,0.10893846351899,0.557694977114413,0,0.227884111694002,0,0,0,0.31900115973192,0,4.26427820814908,1.02193298195737,0.156980256395025,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0.3264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| ||
|short_description=p8@CCNL1 | |short_description=p8@CCNL1 | ||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p8@CCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCNL1_5end |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | 35bp_to_ENST00000474539_5end |
EntrezGene: | CCNL1 |
HGNC: | 20569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.49e-12 | 371 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
bone element | 6.11e-08 | 82 |
bone marrow | 7.64e-08 | 76 |
hemolymphoid system | 2.56e-07 | 108 |
skeletal element | 7.57e-07 | 90 |