FFCP PHASE1:Hg19::chr14:79746280..79746291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |EntrezGene=9369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |HGNC=8010 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HDB5 | |UniProt=Q9HDB5 | ||
|association_with_transcript=31bp_to_ENST00000428277_5end | |association_with_transcript=31bp_to_ENST00000428277_5end | ||
|cluster_id=chr14:79746280..79746291,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_12_at_NRXN3_5end | |description=CAGE_peak_12_at_NRXN3_5end | ||
|id=chr14:79746280..79746291,+ | |id=chr14:79746280..79746291,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.81e-99;3!UBERON:0005754;8.34e-34;1!UBERON:0007297;1.17e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.53e-20!57;UBERON:0005068!3.53e-20!57;UBERON:0006241!3.53e-20!57;UBERON:0007135!3.53e-20!57;UBERON:0002616!2.35e-19!59;UBERON:0003075!1.75e-18!86;UBERON:0007284!1.75e-18!86;UBERON:0000955!4.93e-18!69;UBERON:0006238!4.93e-18!69;UBERON:0007023!2.25e-17!115;UBERON:0002346!2.76e-17!90;UBERON:0002619!6.75e-16!22;UBERON:0005743!1.93e-15!86;UBERON:0001017!2.70e-15!82;UBERON:0001950!2.86e-15!20;UBERON:0002791!9.70e-15!33;UBERON:0000073!1.86e-14!94;UBERON:0001016!1.86e-14!94;UBERON:0002020!2.21e-14!34;UBERON:0003528!2.21e-14!34;UBERON:0001893!3.41e-14!34;UBERON:0000956!1.16e-13!25;UBERON:0000203!1.16e-13!25;UBERON:0001869!1.76e-13!32;UBERON:0002780!1.17e-12!41;UBERON:0001890!1.17e-12!41;UBERON:0006240!1.17e-12!41;UBERON:0003080!2.94e-12!42;UBERON:0000033!5.44e-11!123;UBERON:0004121!8.94e-11!169;UBERON:0000924!2.63e-10!173;UBERON:0006601!2.63e-10!173;UBERON:0003056!2.93e-10!61;UBERON:0000153!4.11e-10!129;UBERON:0007811!4.11e-10!129;UBERON:0004733!5.37e-10!12;UBERON:0002028!5.37e-10!12;UBERON:0007277!5.37e-10!12;UBERON:0003076!7.99e-10!15;UBERON:0003057!7.99e-10!15;UBERON:0000064!1.35e-09!219;UBERON:0001871!1.46e-09!7;UBERON:0004732!3.98e-09!13;UBERON:0000349!9.38e-08!5;UBERON:0002680!2.50e-07!9;UBERON:0001895!2.50e-07!9;UBERON:0010092!2.50e-07!9;UBERON:0000025!3.74e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;6.42e-59;9!UBERON:0001895;6.42e-59;9!UBERON:0002037;4.18e-50;6!UBERON:0004733;2.03e-44;12!UBERON:0002028;2.03e-44;12!UBERON:0004732;4.54e-41;13!UBERON:0000998;8.34e-34;1!UBERON:0006868;8.34e-34;1!UBERON:0000988;2.45e-12;3!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0000073;1.58e-09;53!UBERON:0002616;1.58e-09;53!UBERON:0005904;1.63e-09;4!UBERON:0002021;7.25e-08;5!UBERON:0000955;1.29e-07;68!UBERON:0007023;2.16e-07;114!UBERON:0001016;3.48e-07;83!UBERON:0002298;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,6.42e-59,9;UBERON:0001895,6.42e-59,9;UBERON:0010092,6.42e-59,9;UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0004733,2.03e-44,12;UBERON:0002028,2.03e-44,12;UBERON:0007277,2.03e-44,12;UBERON:0004732,4.54e-41,13;UBERON:0003076,1.04e-35,15;UBERON:0003057,1.04e-35,15;UBERON:0000998,7.06e-34,1;UBERON:0006868,7.06e-34,1;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0000988,2.59e-12,3;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0007023,7.60e-11,114;UBERON:0001017,2.04e-10,81;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0005904,1.57e-09,4;UBERON:0001016,1.94e-09,89;UBERON:0010371,2.57e-08,104;UBERON:0002021,7.49e-08,5;UBERON:0002298,8.48e-07,6 | |||
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| ||
|short_description=p12@NRXN3 | |short_description=p12@NRXN3 | ||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p12@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NRXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 31bp_to_ENST00000428277_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | Q9HDB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 6.42e-59 | 9 |
metencephalon | 6.42e-59 | 9 |
future metencephalon | 6.42e-59 | 9 |
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
segmental subdivision of hindbrain | 2.03e-44 | 12 |
hindbrain | 2.03e-44 | 12 |
presumptive hindbrain | 2.03e-44 | 12 |
segmental subdivision of nervous system | 4.54e-41 | 13 |
posterior neural tube | 1.04e-35 | 15 |
chordal neural plate | 1.04e-35 | 15 |
seminal vesicle | 7.06e-34 | 1 |
seminal fluid secreting gland | 7.06e-34 | 1 |
regional part of nervous system | 9.39e-16 | 53 |
regional part of brain | 9.39e-16 | 53 |
neural tube | 5.94e-15 | 56 |
neural rod | 5.94e-15 | 56 |
future spinal cord | 5.94e-15 | 56 |
neural keel | 5.94e-15 | 56 |
pons | 2.59e-12 | 3 |
brain | 2.88e-12 | 68 |
future brain | 2.88e-12 | 68 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
adult organism | 7.60e-11 | 114 |
central nervous system | 2.04e-10 | 81 |
neural plate | 2.04e-10 | 82 |
presumptive neural plate | 2.04e-10 | 82 |
neurectoderm | 5.89e-10 | 86 |
duct of male reproductive system | 1.57e-09 | 4 |
nervous system | 1.94e-09 | 89 |
ecto-epithelium | 2.57e-08 | 104 |
occipital lobe | 7.49e-08 | 5 |
brainstem | 8.48e-07 | 6 |