FFCP PHASE1:Hg19::chr2:109336008..109336031,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:109336008..109336031,+
|short_description=p3@RANBP2
|description=CAGE_peak_3_at_RANBP2_5end
|association_with_transcript=0bp_to_ENST00000425282_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5903 | |EntrezGene=5903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9848 | |HGNC=9848 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBP7 | |UniProt=F8WBP7 | ||
|association_with_transcript=0bp_to_ENST00000425282_5end | |||
|cluster_id=chr2:109336008..109336031,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_RANBP2_5end | |||
|id=chr2:109336008..109336031,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.52e-21!42;CL:0000738!2.74e-18!140;CL:0000860!3.41e-18!45;CL:0000766!7.15e-18!76;CL:0000557!2.71e-15!71;CL:0000037!3.85e-14!172;CL:0000566!3.85e-14!172;CL:0000839!1.75e-13!70;CL:0000763!4.88e-13!112;CL:0000049!4.88e-13!112;CL:0002031!9.51e-13!124;CL:0002009!1.14e-12!65;CL:0002032!2.30e-12!165;CL:0000837!2.30e-12!165;CL:0000988!8.13e-12!182;CL:0002194!1.34e-11!63;CL:0000576!1.34e-11!63;CL:0000040!1.34e-11!63;CL:0000559!1.34e-11!63;CL:0002087!5.44e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-29;33!CL:0002057;2.59e-29;33!CL:0000473;3.65e-21;39!CL:0000234;3.65e-21;39!CL:0000576;3.43e-18;48!CL:0000766;5.44e-16;69!CL:0000094;4.78e-11;8!CL:0002087;1.17e-08;104!CL:0000624;1.25e-08;6!CL:0000738;2.81e-08;136!CL:0000081;1.98e-07;11!CL:0000763;3.34e-07;100!CL:0002393;5.56e-07;6!CL:0002397;5.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.46e-36,136;CL:0000766,1.57e-34,72;CL:0000860,2.49e-34,42;CL:0002057,2.49e-34,42;CL:0000473,5.54e-30,48;CL:0000234,5.54e-30,48;CL:0000557,1.95e-29,67;CL:0000037,1.51e-27,168;CL:0002009,4.99e-25,61;CL:0002031,5.06e-25,120;CL:0000839,6.13e-25,66;CL:0000988,7.99e-25,177;CL:0002032,3.67e-24,161;CL:0000837,3.67e-24,161;CL:0000763,1.75e-23,108;CL:0000049,1.75e-23,108;CL:0002087,3.67e-23,115;CL:0002194,7.21e-23,59;CL:0000576,7.21e-23,59;CL:0000040,7.21e-23,59;CL:0000559,7.21e-23,59;CL:0000094,5.12e-11,8;CL:0000624,1.21e-08,6;CL:0000081,2.07e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-24;42!CL:0000049;5.80e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.23e-13!80;UBERON:0001474!3.51e-13!86;UBERON:0002390!3.69e-12!102;UBERON:0003061!3.69e-12!102;UBERON:0002193!1.29e-10!112;UBERON:0004765!5.62e-10!101;UBERON:0001434!5.62e-10!101;UBERON:0002405!1.21e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-26,76;UBERON:0001474,8.58e-25,82;UBERON:0002390,1.48e-24,98;UBERON:0003061,1.48e-24,98;UBERON:0002405,1.00e-21,93;UBERON:0004765,4.10e-21,90;UBERON:0002193,1.35e-20,108;UBERON:0001434,3.11e-18,100;UBERON:0003081,2.64e-09,203;UBERON:0002204,5.18e-07,167 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.502170558379211,0,0.410502947249729,0.0787107813136792,9.4407426443737,11.5148819429164,7.1215416725395,0,0.6024118375565,0,0.387336002901508,0.284338464974843,0.587200878669695,11.0799081706375,5.61524452916397,7.81239134577067,0.223915474239924,0,0,2.4717700592526,6.42389104270976,2.42584061187816,2.55671940596253,3.70051099219643,8.3620720141678,3.16461631554365,3.07392847834921,6.62150243688039,7.23965929546899,18.0735711403471,10.8341189275473,4.89430082810772,4.91231070104122,9.21366286224847,9.79468455586888,16.6883094079569,33.8848676673492,2.30895910130701,2.59302754908121,3.40979800426155,2.03146467040009,2.8369261234557,3.73693349397345,5.7787193009051,9.38669253156363,9.1219314776149,0.605399502633369,5.89244217580104,1.58231193720442,1.90129757680748,1.27562579979026,2.09658645508376,4.6054738770063,3.30389164251314,1.6072558669708,0.570025487482497,0.59675003159727,0.730656615058536,1.75996244461323,0,0,0,0,0,0,0,3.98449078376614,5.87237189370939,4.58727873750275,10.5737062863221,15.694239763483,0.263384084775077,7.67168103443949,7.8602152549833,14.5977064289652,0,14.9924242651452,5.6813736688168,1.94826728407911,0.334231370655521,7.65975359434577,3.54454231333794,4.87446954777028,0,0.520237390239513,0,0.276350017785848,0.289803085735052,5.93146252648242,2.67540828089713,4.18142095219907,0.113309342697566,5.74830740402882,3.77990190030893,2.53019692019503,0.318565414324097,0.651083453856419,1.90090408889675,0,0.127986611154418,0,0,0,15.7253259715291,6.15112450302067,9.55841065626473,2.43806866313962,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,1.24430121722827,0,0,0.97364218096405,0.522389211897802,0.26591592103773,27.6649124194197,16.0158575018436,15.9726725571713,0,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0,1.52054421143703,0,1.47065232138347,1.62028389576352,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0.366403487860815,27.6738876615733,42.6558290563158,0,1.49091585508596,0,0.926864265692532,0.860509862246441,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.647491777472526,0.280901613404497,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0.213557388818567,0,0.600182192168805,0.309157587715317,0.257640540045629,0,1.85653965465393,0.0974370051611986,0,0,0.161646056818812,0.710019185033229,0,0.169560592310488,0.386521706326594,0.818238361772504,0.573609190778008,0.243947412259191,0.132529768321485,0.580969714347592,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,1.4763109092493,0,0,0,0,0.982827216677626,3.54473944008842,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0.380508304469197,0,0.858486162094873,0,0,0.297262324577456,0,0.671928512795438,0,0.179117045405697,0.290633938513962,0,147.798971368783,0.528290604079356,12.8543431635279,2.01767934783746,24.9960018184232,0.253991577168676,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,2.00902836572851,0,0,0,2.85273810081437,1.01346914667305,0.205476322550383,0.358121926479791,0.112085143993527,9.65450724989443,6.68445482064504,6.93052395910641,0.254094624222463,3.90419561572865,0.773288812777695,0.335032530668698,0.637938751653163,4.49404214368309,5.9832291840805,7.0450637284126,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0,0,0,6.20304078368662,7.76571122947021,13.5543998410374,0,0,0,0,0.460385919864187,0.561320188866147,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0,0.574890092096664,0,0.348631135379878,0.604297247958111,0.802025881213139,0.184161977871793,0.229628896329213,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0,0,1.75169719801128,0.0915694648183434,0.330037999682352,0.574265537996172,0,0,0,0,0.307007349452259,0.551346289938122,0.214840489736547,0.290033387828457,0.340906509664404,0.0890320356467374,0.826424576804891,0.384380134730212,0.510450849978337,0,0.464845549297286,2.20368642781448,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0.78494864019923,0.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| ||
|short_description=p3@RANBP2 | |||
}} | }} |
Latest revision as of 06:50, 16 September 2015
Short description: | p3@RANBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RANBP2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000425282_5end |
EntrezGene: | RANBP2 |
HGNC: | 9848 |
UniProt: | F8WBP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.46e-36 | 136 |
myeloid leukocyte | 1.57e-34 | 72 |
classical monocyte | 2.49e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-34 | 42 |
defensive cell | 5.54e-30 | 48 |
phagocyte | 5.54e-30 | 48 |
granulocyte monocyte progenitor cell | 1.95e-29 | 67 |
hematopoietic stem cell | 1.51e-27 | 168 |
macrophage dendritic cell progenitor | 4.99e-25 | 61 |
hematopoietic lineage restricted progenitor cell | 5.06e-25 | 120 |
myeloid lineage restricted progenitor cell | 6.13e-25 | 66 |
hematopoietic cell | 7.99e-25 | 177 |
hematopoietic oligopotent progenitor cell | 3.67e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-24 | 161 |
myeloid cell | 1.75e-23 | 108 |
common myeloid progenitor | 1.75e-23 | 108 |
nongranular leukocyte | 3.67e-23 | 115 |
monopoietic cell | 7.21e-23 | 59 |
monocyte | 7.21e-23 | 59 |
monoblast | 7.21e-23 | 59 |
promonocyte | 7.21e-23 | 59 |
granulocyte | 5.12e-11 | 8 |
CD4-positive, alpha-beta T cell | 1.21e-08 | 6 |
blood cell | 2.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-26 | 76 |
bone element | 8.58e-25 | 82 |
hematopoietic system | 1.48e-24 | 98 |
blood island | 1.48e-24 | 98 |
immune system | 1.00e-21 | 93 |
skeletal element | 4.10e-21 | 90 |
hemolymphoid system | 1.35e-20 | 108 |
skeletal system | 3.11e-18 | 100 |
lateral plate mesoderm | 2.64e-09 | 203 |
musculoskeletal system | 5.18e-07 | 167 |