FFCP PHASE1:Hg19::chr2:109335929..109336002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5903 | |EntrezGene=5903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9848 | |HGNC=9848 | ||
|TSSclassifier=strong | |||
|UniProt=P49792,E9PGT0 | |UniProt=P49792,E9PGT0 | ||
|association_with_transcript=0bp_to_ENST00000283195,ENST00000409491,NM_006267,uc002tem.3_5end | |association_with_transcript=0bp_to_ENST00000283195,ENST00000409491,NM_006267,uc002tem.3_5end | ||
|cluster_id=chr2:109335929..109336002,+ | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_1_at_RANBP2_5end | |description=CAGE_peak_1_at_RANBP2_5end | ||
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|ontology_enrichment_celltype=CL:0000738!3.06e-33!140;CL:0000037!7.98e-32!172;CL:0000566!7.98e-32!172;CL:0002032!9.81e-29!165;CL:0000837!9.81e-29!165;CL:0000988!9.79e-28!182;CL:0002031!3.80e-25!124;CL:0002087!9.42e-23!119;CL:0000766!1.18e-20!76;CL:0000763!1.82e-20!112;CL:0000049!1.82e-20!112;CL:0000557!7.73e-18!71;CL:0002057!8.09e-18!42;CL:0000839!1.15e-16!70;CL:0000860!1.38e-15!45;CL:0002009!4.52e-15!65;CL:0002194!4.36e-14!63;CL:0000576!4.36e-14!63;CL:0000040!4.36e-14!63;CL:0000559!4.36e-14!63;CL:0000791!5.31e-09!18;CL:0000789!5.31e-09!18;CL:0002420!5.31e-09!18;CL:0002419!5.31e-09!18;CL:0000790!5.31e-09!18;CL:0000838!5.11e-08!52;CL:0000542!7.11e-08!53;CL:0000051!7.11e-08!53;CL:0000084!1.90e-07!25;CL:0000827!1.90e-07!25 | |ontology_enrichment_celltype=CL:0000738!3.06e-33!140;CL:0000037!7.98e-32!172;CL:0000566!7.98e-32!172;CL:0002032!9.81e-29!165;CL:0000837!9.81e-29!165;CL:0000988!9.79e-28!182;CL:0002031!3.80e-25!124;CL:0002087!9.42e-23!119;CL:0000766!1.18e-20!76;CL:0000763!1.82e-20!112;CL:0000049!1.82e-20!112;CL:0000557!7.73e-18!71;CL:0002057!8.09e-18!42;CL:0000839!1.15e-16!70;CL:0000860!1.38e-15!45;CL:0002009!4.52e-15!65;CL:0002194!4.36e-14!63;CL:0000576!4.36e-14!63;CL:0000040!4.36e-14!63;CL:0000559!4.36e-14!63;CL:0000791!5.31e-09!18;CL:0000789!5.31e-09!18;CL:0002420!5.31e-09!18;CL:0002419!5.31e-09!18;CL:0000790!5.31e-09!18;CL:0000838!5.11e-08!52;CL:0000542!7.11e-08!53;CL:0000051!7.11e-08!53;CL:0000084!1.90e-07!25;CL:0000827!1.90e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-15;33!CL:0002057;6.08e-15;33!CL:0000576;1.37e-11;48!CL:0000473;1.06e-10;39!CL:0000234;1.06e-10;39!CL:0000766;7.69e-10;69!CL:0000791;5.07e-09;18!CL:0000789;5.07e-09;18!CL:0002419;5.07e-09;18!CL:0002087;2.98e-08;104!CL:0000738;1.16e-07;136!CL:0000084;1.82e-07;25 | |ontology_enrichment_celltype_v019=CL:0000860;6.08e-15;33!CL:0002057;6.08e-15;33!CL:0000576;1.37e-11;48!CL:0000473;1.06e-10;39!CL:0000234;1.06e-10;39!CL:0000766;7.69e-10;69!CL:0000791;5.07e-09;18!CL:0000789;5.07e-09;18!CL:0002419;5.07e-09;18!CL:0002087;2.98e-08;104!CL:0000738;1.16e-07;136!CL:0000084;1.82e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.32e-35,136;CL:0000037,3.77e-33,168;CL:0002032,5.26e-30,161;CL:0000837,5.26e-30,161;CL:0000988,1.21e-29,177;CL:0002031,1.37e-26,120;CL:0002087,3.90e-24,115;CL:0000766,1.68e-22,72;CL:0000763,8.37e-22,108;CL:0000049,8.37e-22,108;CL:0000557,1.43e-19,67;CL:0000839,2.53e-18,66;CL:0000860,8.09e-18,42;CL:0002057,8.09e-18,42;CL:0002009,1.08e-16,61;CL:0002194,1.16e-15,59;CL:0000576,1.16e-15,59;CL:0000040,1.16e-15,59;CL:0000559,1.16e-15,59;CL:0000473,2.60e-15,48;CL:0000234,2.60e-15,48;CL:0000791,5.31e-09,18;CL:0000789,5.31e-09,18;CL:0002420,5.31e-09,18;CL:0002419,5.31e-09,18;CL:0000790,5.31e-09,18;CL:0000838,5.11e-08,52;CL:0000542,7.11e-08,53;CL:0000051,7.11e-08,53;CL:0000084,1.90e-07,25;CL:0000827,1.90e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.56e-13;42!CL:0000790;5.07e-09;18 | |ontology_enrichment_development_v019=CL:0002057;3.56e-13;42!CL:0000790;5.07e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.89e-14!115;UBERON:0002390!6.31e-14!102;UBERON:0003061!6.31e-14!102;UBERON:0002371!1.83e-13!80;UBERON:0001474!1.95e-13!86;UBERON:0002193!7.46e-12!112;UBERON:0004765!2.75e-10!101;UBERON:0001434!2.75e-10!101;UBERON:0002405!2.87e-09!115;UBERON:0003080!5.64e-08!42;UBERON:0002780!1.26e-07!41;UBERON:0001890!1.26e-07!41;UBERON:0006240!1.26e-07!41;UBERON:0001049!1.32e-07!57;UBERON:0005068!1.32e-07!57;UBERON:0006241!1.32e-07!57;UBERON:0007135!1.32e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!5.89e-14!115;UBERON:0002390!6.31e-14!102;UBERON:0003061!6.31e-14!102;UBERON:0002371!1.83e-13!80;UBERON:0001474!1.95e-13!86;UBERON:0002193!7.46e-12!112;UBERON:0004765!2.75e-10!101;UBERON:0001434!2.75e-10!101;UBERON:0002405!2.87e-09!115;UBERON:0003080!5.64e-08!42;UBERON:0002780!1.26e-07!41;UBERON:0001890!1.26e-07!41;UBERON:0006240!1.26e-07!41;UBERON:0001049!1.32e-07!57;UBERON:0005068!1.32e-07!57;UBERON:0006241!1.32e-07!57;UBERON:0007135!1.32e-07!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@RANBP2 | |short_description=p1@RANBP2 | ||
}} | }} |
Latest revision as of 06:49, 16 September 2015
Short description: | p1@RANBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RANBP2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000283195, ENST00000409491, NM_006267, uc002tem.3_5end |
EntrezGene: | RANBP2 |
HGNC: | 9848 |
UniProt: | P49792E9PGT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.43e-15 | 98 |
blood island | 5.43e-15 | 98 |
bone marrow | 1.02e-14 | 76 |
bone element | 1.28e-14 | 82 |
adult organism | 1.14e-13 | 114 |
hemolymphoid system | 9.91e-13 | 108 |
immune system | 1.16e-12 | 93 |
skeletal element | 3.57e-12 | 90 |
skeletal system | 2.34e-10 | 100 |
regional part of forebrain | 1.26e-07 | 41 |
forebrain | 1.26e-07 | 41 |
anterior neural tube | 1.26e-07 | 41 |
future forebrain | 1.26e-07 | 41 |
neural tube | 2.74e-07 | 56 |
neural rod | 2.74e-07 | 56 |
future spinal cord | 2.74e-07 | 56 |
neural keel | 2.74e-07 | 56 |
regional part of nervous system | 4.90e-07 | 53 |
regional part of brain | 4.90e-07 | 53 |
nervous system | 5.13e-07 | 89 |