FFCP PHASE1:Hg19::chr9:136215044..136215086,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:136215044..136215086,+ to FFCP PHASE1:Hg19::chr9:136215044..136215086,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6130 | |EntrezGene=6130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10364 | |HGNC=10364 | ||
|TSSclassifier=strong | |||
|UniProt=P62424,Q5T8U4 | |UniProt=P62424,Q5T8U4 | ||
|association_with_transcript=0bp_to_ENST00000323345,ENST00000463740,ENST00000496554,NM_000972,uc004cde.1_5end | |||
|cluster_id=chr9:136215044..136215086,+ | |||
|coexpression_cluster_id=C2568 | |||
|description=CAGE_peak_1_at_RPL7A_5end | |||
|id=chr9:136215044..136215086,+ | |||
|ontology_enrichment_celltype=CL:0000003!6.20e-31!722;CL:0000012!5.85e-26!682;CL:0000144!2.27e-25!625;CL:0002371!5.59e-25!591;CL:0000548!5.15e-24!679;CL:0000004!5.15e-24!679;CL:0000255!5.15e-24!679;CL:0000034!6.05e-18!444;CL:0000048!1.28e-16!430;CL:0000723!2.46e-16!436;CL:0002057!2.52e-14!42;CL:0000860!3.01e-13!45;CL:0002320!1.17e-12!365;CL:0000063!2.81e-12!578;CL:0000988!6.76e-12!182;CL:0000037!4.23e-11!172;CL:0000566!4.23e-11!172;CL:0000134!4.72e-11!358;CL:0002032!7.10e-11!165;CL:0000837!7.10e-11!165;CL:0002031!9.17e-11!124;CL:0000219!1.37e-10!390;CL:0002087!3.78e-09!119;CL:0000738!1.48e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.90e-12;33!CL:0002057;5.90e-12;33!CL:0000473;2.14e-07;39!CL:0000234;2.14e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,8.97e-18,441;CL:0000048,1.84e-16,427;CL:0000723,3.55e-16,433;CL:0000860,2.52e-14,42;CL:0002057,2.52e-14,42;CL:0002320,1.52e-12,361;CL:0000988,6.53e-12,177;CL:0000037,2.14e-11,168;CL:0000473,3.46e-11,48;CL:0000234,3.46e-11,48;CL:0002032,3.53e-11,161;CL:0000837,3.53e-11,161;CL:0002031,3.69e-11,120;CL:0000134,6.02e-11,354;CL:0000219,1.79e-10,386;CL:0002087,1.68e-09,115;CL:0000738,7.71e-09,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.04e-12!375;UBERON:0002204!2.11e-07!167;UBERON:0003081!9.51e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.05e-11,371;UBERON:0002204,4.42e-08,167;UBERON:0004765,2.84e-07,90 | |||
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| ||
|short_description=p1@RPL7A | |||
}} | }} |
Latest revision as of 06:44, 16 September 2015
Short description: | p1@RPL7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL7A_5end |
Coexpression cluster: | C2568_CD4_Smooth_Aortic_acute_CD34_Fibroblast_CD8 |
Association with transcript: | 0bp_to_ENST00000323345, ENST00000463740, ENST00000496554, NM_000972, uc004cde.1_5end |
EntrezGene: | RPL7A |
HGNC: | 10364 |
UniProt: | P62424Q5T8U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 8.97e-18 | 441 |
multi fate stem cell | 1.84e-16 | 427 |
somatic stem cell | 3.55e-16 | 433 |
classical monocyte | 2.52e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-14 | 42 |
connective tissue cell | 1.52e-12 | 361 |
hematopoietic cell | 6.53e-12 | 177 |
hematopoietic stem cell | 2.14e-11 | 168 |
defensive cell | 3.46e-11 | 48 |
phagocyte | 3.46e-11 | 48 |
hematopoietic oligopotent progenitor cell | 3.53e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.53e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.69e-11 | 120 |
mesenchymal cell | 6.02e-11 | 354 |
motile cell | 1.79e-10 | 386 |
nongranular leukocyte | 1.68e-09 | 115 |
leukocyte | 7.71e-09 | 136 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.05e-11 | 371 |
musculoskeletal system | 4.42e-08 | 167 |
skeletal element | 2.84e-07 | 90 |