FFCP PHASE1:Hg19::chr5:150404893..150404902,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:150404893..150404902,+
|short_description=p4@GPX3
|description=CAGE_peak_4_at_GPX3_5end
|association_with_transcript=-2bp_to_ENST00000521632_5end
|EntrezG...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4555 | |HGNC=4555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000521632_5end | |||
|cluster_id=chr5:150404893..150404902,+ | |||
|coexpression_cluster_id=C331 | |||
|description=CAGE_peak_4_at_GPX3_5end | |||
|id=chr5:150404893..150404902,+ | |||
|ontology_enrichment_celltype=CL:0002615!7.21e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;4.35e-23;3!CL:0000136;4.35e-12;13!CL:0002521;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.76e-23,3;CL:0000136,1.65e-10,15;CL:0002521,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.83e-18;1!UBERON:0010227;1.03e-17;1!UBERON:0007123;3.25e-14;5!UBERON:0006965;1.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.90e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.03e-17;1!UBERON:0002046;3.25e-14;5!UBERON:0003688;4.68e-12;6!UBERON:0002358;4.68e-12;6!UBERON:0003684;4.68e-12;6!UBERON:0001178;4.68e-12;6!UBERON:0002081;1.57e-09;2!UBERON:0004457;2.42e-08;9!UBERON:0000042;2.42e-08;9!UBERON:0004151;9.11e-07;3!UBERON:0002190;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,6.23e-18,1;UBERON:0002046,2.95e-14,5;UBERON:0004117,2.95e-14,5;UBERON:0007689,2.95e-14,5;UBERON:0007123,2.95e-14,5;UBERON:0003091,2.95e-14,5;UBERON:0003688,5.37e-12,6;UBERON:0002358,5.37e-12,6;UBERON:0003684,5.37e-12,6;UBERON:0001178,5.37e-12,6;UBERON:0002081,1.22e-09,2;UBERON:0010227,1.22e-09,2;UBERON:0009722,5.64e-07,11;UBERON:0007690,5.64e-07,11;UBERON:0004151,7.70e-07,3;UBERON:0002190,9.64e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,1.0007329835313,3.5756887554183,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.89268582976749,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0,3.07342258466873,0.314727528809989,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0.924351257262837,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0.224263725161227,1.33659032384146,2.02117188958219,0,0.342233301085281,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,1.0007329835313,3.5756887554183,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.89268582976749,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0,3.07342258466873,0.314727528809989,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0.924351257262837,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0.224263725161227,1.33659032384146,2.02117188958219,0,0.342233301085281,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0,0 | ||
|short_description=p4@GPX3 | |||
}} | }} |
Latest revision as of 06:42, 16 September 2015
Short description: | p4@GPX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPX3_5end |
Coexpression cluster: | C331_kidney_thyroid_breast_Adipocyte_adipose_retina_vagina |
Association with transcript: | -2bp_to_ENST00000521632_5end |
EntrezGene: | NA |
HGNC: | 4555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.76e-23 | 3 |
fat cell | 1.65e-10 | 15 |
subcutaneous fat cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 6.23e-18 | 1 |
thyroid gland | 2.95e-14 | 5 |
pharyngeal pouch | 2.95e-14 | 5 |
thyroid diverticulum | 2.95e-14 | 5 |
pharyngeal pouch 2 | 2.95e-14 | 5 |
thyroid primordium | 2.95e-14 | 5 |
omentum | 5.37e-12 | 6 |
peritoneum | 5.37e-12 | 6 |
abdominal cavity | 5.37e-12 | 6 |
visceral peritoneum | 5.37e-12 | 6 |
cardiac atrium | 1.22e-09 | 2 |
future cardiac atrium | 1.22e-09 | 2 |
entire pharyngeal arch endoderm | 5.64e-07 | 11 |
early pharyngeal endoderm | 5.64e-07 | 11 |
cardiac chamber | 7.70e-07 | 3 |
subcutaneous adipose tissue | 9.64e-07 | 3 |