FFCP PHASE1:Hg19::chr16:30080136..30080158,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30080136..30080158,+ to FFCP PHASE1:Hg19::chr16:30080136..30080158,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=226 | |EntrezGene=226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |HGNC=414 | ||
|TSSclassifier=strong | |||
|UniProt=P04075 | |UniProt=P04075 | ||
|association_with_transcript=-15bp_to_M21190_5end | |||
|cluster_id=chr16:30080136..30080158,+ | |||
|coexpression_cluster_id=C1219 | |||
|description=CAGE_peak_15_at_ALDOA_5end | |||
|id=chr16:30080136..30080158,+ | |||
|ontology_enrichment_celltype=CL:0000192!4.45e-09!42;CL:0000514!4.45e-09!42;CL:0000359!8.71e-09!32;CL:0000680!3.04e-08!57;CL:0000056!3.04e-08!57;CL:0000355!3.04e-08!57;CL:0000183!4.98e-08!59;CL:0002371!8.90e-08!591;CL:0000187!1.24e-07!54;CL:0000393!2.41e-07!60;CL:0000211!2.41e-07!60;CL:0000055!5.78e-07!180;CL:0000144!9.94e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.19e-09;32!CL:0000473;2.05e-07;39!CL:0000234;2.05e-07;39!CL:0000860;4.22e-07;33!CL:0002057;4.22e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.94e-09,32;CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000680,6.62e-08,58;CL:0000056,6.62e-08,58;CL:0000355,6.62e-08,58;CL:0000473,2.41e-07,48;CL:0000234,2.41e-07,48;CL:0000187,3.13e-07,55;CL:0000393,3.53e-07,61;CL:0000211,3.53e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.62e-11!42;UBERON:0003509!8.62e-11!42;UBERON:0004572!8.62e-11!42;UBERON:0004290!9.64e-11!70;UBERON:0000914!2.48e-10!83;UBERON:0002329!2.48e-10!83;UBERON:0003077!2.48e-10!83;UBERON:0003059!2.48e-10!83;UBERON:0007282!2.48e-10!83;UBERON:0009618!2.48e-10!83;UBERON:0007285!2.48e-10!83;UBERON:0001134!4.73e-10!61;UBERON:0002036!4.73e-10!61;UBERON:0003082!4.73e-10!61;UBERON:0002385!1.62e-09!63;UBERON:0001015!1.62e-09!63;UBERON:0000383!1.62e-09!63;UBERON:0002204!6.00e-09!167;UBERON:0000486!1.15e-08!82;UBERON:0001981!6.60e-08!60;UBERON:0007500!6.60e-08!60;UBERON:0004537!6.60e-08!60;UBERON:0006965!6.60e-08!60;UBERON:0004573!8.87e-08!33;UBERON:0004571!8.87e-08!33;UBERON:0000055!1.52e-07!69;UBERON:0004872!1.55e-07!84;UBERON:0002049!6.50e-07!79;UBERON:0007798!6.50e-07!79;UBERON:0000926!9.34e-07!448;UBERON:0004120!9.34e-07!448;UBERON:0006603!9.34e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.10e-08;42!UBERON:0003509;8.10e-08;42!UBERON:0004572;8.10e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.75e-11,78;UBERON:0007524,4.41e-11,73;UBERON:0001637,5.34e-11,42;UBERON:0003509,5.34e-11,42;UBERON:0004572,5.34e-11,42;UBERON:0003077,1.06e-10,72;UBERON:0007285,1.06e-10,72;UBERON:0002329,1.30e-10,71;UBERON:0003059,1.30e-10,71;UBERON:0007282,1.30e-10,71;UBERON:0004290,1.30e-10,71;UBERON:0009618,1.30e-10,71;UBERON:0000926,1.58e-10,315;UBERON:0004120,1.58e-10,315;UBERON:0006603,1.58e-10,315;UBERON:0001134,7.35e-10,62;UBERON:0002036,7.35e-10,62;UBERON:0003082,7.35e-10,62;UBERON:0002385,1.91e-09,64;UBERON:0001015,1.91e-09,64;UBERON:0000383,1.91e-09,64;UBERON:0002204,3.02e-09,167;UBERON:0000486,2.61e-08,83;UBERON:0007500,5.16e-08,59;UBERON:0001981,5.16e-08,59;UBERON:0004537,5.16e-08,59;UBERON:0006965,5.16e-08,59;UBERON:0004872,8.25e-08,83;UBERON:0004573,1.32e-07,33;UBERON:0004571,1.32e-07,33;UBERON:0003081,3.11e-07,203;UBERON:0000055,4.67e-07,68;UBERON:0005256,7.94e-07,122 | |||
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| ||
|short_description=p15@ALDOA | |||
}} | }} |
Latest revision as of 06:19, 16 September 2015
Short description: | p15@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ALDOA_5end |
Coexpression cluster: | C1219_Smooth_Tracheal_penis_tongue_skeletal_leiomyoma_diaphragm |
Association with transcript: | -15bp_to_M21190_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.94e-09 | 32 |
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
muscle precursor cell | 6.62e-08 | 58 |
myoblast | 6.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.62e-08 | 58 |
defensive cell | 2.41e-07 | 48 |
phagocyte | 2.41e-07 | 48 |
muscle cell | 3.13e-07 | 55 |
electrically responsive cell | 3.53e-07 | 61 |
electrically active cell | 3.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.75e-11 | 78 |
dense mesenchyme tissue | 4.41e-11 | 73 |
artery | 5.34e-11 | 42 |
arterial blood vessel | 5.34e-11 | 42 |
arterial system | 5.34e-11 | 42 |
paraxial mesoderm | 1.06e-10 | 72 |
presumptive paraxial mesoderm | 1.06e-10 | 72 |
somite | 1.30e-10 | 71 |
presomitic mesoderm | 1.30e-10 | 71 |
presumptive segmental plate | 1.30e-10 | 71 |
dermomyotome | 1.30e-10 | 71 |
trunk paraxial mesoderm | 1.30e-10 | 71 |
mesoderm | 1.58e-10 | 315 |
mesoderm-derived structure | 1.58e-10 | 315 |
presumptive mesoderm | 1.58e-10 | 315 |
skeletal muscle tissue | 7.35e-10 | 62 |
striated muscle tissue | 7.35e-10 | 62 |
myotome | 7.35e-10 | 62 |
muscle tissue | 1.91e-09 | 64 |
musculature | 1.91e-09 | 64 |
musculature of body | 1.91e-09 | 64 |
musculoskeletal system | 3.02e-09 | 167 |
multilaminar epithelium | 2.61e-08 | 83 |
epithelial tube open at both ends | 5.16e-08 | 59 |
blood vessel | 5.16e-08 | 59 |
blood vasculature | 5.16e-08 | 59 |
vascular cord | 5.16e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 8.25e-08 | 83 |
systemic artery | 1.32e-07 | 33 |
systemic arterial system | 1.32e-07 | 33 |
lateral plate mesoderm | 3.11e-07 | 203 |
vessel | 4.67e-07 | 68 |
trunk mesenchyme | 7.94e-07 | 122 |