FFCP PHASE1:Hg19::chr19:14887645..14887660,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:14887645..14887660,- to FFCP PHASE1:Hg19::chr19:14887645..14887660,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30817 | |EntrezGene=30817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3337 | |HGNC=3337 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWB8,E7ESD7 | |UniProt=B4DWB8,E7ESD7 | ||
|association_with_transcript=0bp_to_ENST00000392962,ENST00000392965_5end | |||
|cluster_id=chr19:14887645..14887660,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_EMR2_5end | |||
|id=chr19:14887645..14887660,- | |||
|ontology_enrichment_celltype=CL:0000766!2.53e-36!76;CL:0000763!6.16e-32!112;CL:0000049!6.16e-32!112;CL:0000557!2.19e-30!71;CL:0000839!2.40e-30!70;CL:0000860!2.70e-28!45;CL:0002194!2.76e-28!63;CL:0000576!2.76e-28!63;CL:0000040!2.76e-28!63;CL:0000559!2.76e-28!63;CL:0002009!3.58e-27!65;CL:0002057!7.50e-27!42;CL:0000037!2.12e-20!172;CL:0000566!2.12e-20!172;CL:0000988!3.38e-20!182;CL:0002032!5.93e-19!165;CL:0000837!5.93e-19!165;CL:0000738!9.36e-18!140;CL:0002031!1.19e-14!124;CL:0002087!8.71e-14!119;CL:0000134!2.44e-11!358;CL:0000048!1.40e-10!430;CL:0000723!6.34e-10!436;CL:0000034!8.84e-10!444;CL:0002320!1.03e-09!365;CL:0000081!2.22e-07!11;CL:0000219!2.48e-07!390;CL:0000094!9.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.38e-20;33!CL:0002057;3.38e-20;33!CL:0000473;5.97e-19;39!CL:0000234;5.97e-19;39!CL:0000766;3.61e-16;69!CL:0000576;1.58e-15;48!CL:0000763;1.60e-10;100!CL:0000081;1.59e-07;11!CL:0000094;7.20e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-36,72;CL:0000763,3.72e-32,108;CL:0000049,3.72e-32,108;CL:0000557,1.92e-30,67;CL:0000839,2.07e-30,66;CL:0000473,8.93e-30,48;CL:0000234,8.93e-30,48;CL:0002194,2.40e-28,59;CL:0000576,2.40e-28,59;CL:0000040,2.40e-28,59;CL:0000559,2.40e-28,59;CL:0000860,2.17e-27,42;CL:0002057,2.17e-27,42;CL:0002009,3.65e-27,61;CL:0000988,1.38e-20,177;CL:0000037,2.89e-20,168;CL:0002032,9.97e-19,161;CL:0000837,9.97e-19,161;CL:0000738,2.24e-17,136;CL:0002031,4.32e-14,120;CL:0002087,2.72e-13,115;CL:0000134,1.70e-11,354;CL:0000048,1.25e-10,427;CL:0002320,5.18e-10,361;CL:0000723,6.82e-10,433;CL:0000034,1.72e-09,441;CL:0000081,1.67e-07,11;CL:0000219,2.27e-07,386;CL:0000094,7.25e-07,8;CL:0002393,9.78e-07,9;CL:0002397,9.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.12e-20;42!CL:0000049;2.17e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.08e-32!102;UBERON:0003061!4.08e-32!102;UBERON:0002193!2.04e-31!112;UBERON:0002371!5.49e-26!80;UBERON:0001474!2.23e-22!86;UBERON:0002405!5.03e-19!115;UBERON:0003081!2.50e-16!216;UBERON:0004765!1.06e-13!101;UBERON:0001434!1.06e-13!101;UBERON:0002204!2.50e-11!167;UBERON:0000178!8.05e-09!15;UBERON:0000179!8.05e-09!15;UBERON:0000463!8.05e-09!15;UBERON:0002384!4.50e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.65e-09;15!UBERON:0000179;5.65e-09;15!UBERON:0000463;5.65e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-32,98;UBERON:0003061,3.74e-32,98;UBERON:0002193,2.16e-31,108;UBERON:0002371,2.66e-26,76;UBERON:0002405,9.66e-24,93;UBERON:0001474,1.72e-22,82;UBERON:0004765,1.15e-16,90;UBERON:0003081,1.68e-16,203;UBERON:0000926,3.70e-14,315;UBERON:0004120,3.70e-14,315;UBERON:0006603,3.70e-14,315;UBERON:0001434,2.61e-12,100;UBERON:0002204,3.64e-10,167;UBERON:0000178,5.64e-09,15;UBERON:0000179,5.64e-09,15;UBERON:0000463,5.64e-09,15;UBERON:0002384,2.15e-08,371 | |||
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| ||
|short_description=p1@EMR2 | |||
}} | }} |
Latest revision as of 05:58, 16 September 2015
Short description: | p1@EMR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000392962, ENST00000392965_5end |
EntrezGene: | EMR2 |
HGNC: | 3337 |
UniProt: | B4DWB8E7ESD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-32 | 98 |
blood island | 3.74e-32 | 98 |
hemolymphoid system | 2.16e-31 | 108 |
bone marrow | 2.66e-26 | 76 |
immune system | 9.66e-24 | 93 |
bone element | 1.72e-22 | 82 |
skeletal element | 1.15e-16 | 90 |
lateral plate mesoderm | 1.68e-16 | 203 |
mesoderm | 3.70e-14 | 315 |
mesoderm-derived structure | 3.70e-14 | 315 |
presumptive mesoderm | 3.70e-14 | 315 |
skeletal system | 2.61e-12 | 100 |
musculoskeletal system | 3.64e-10 | 167 |
blood | 5.64e-09 | 15 |
haemolymphatic fluid | 5.64e-09 | 15 |
organism substance | 5.64e-09 | 15 |
connective tissue | 2.15e-08 | 371 |