FFCP PHASE1:Hg19::chr2:239149300..239149321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55502 | |EntrezGene=55502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18254 | |HGNC=18254 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436051_5end | |association_with_transcript=0bp_to_ENST00000436051_5end | ||
|cluster_id=chr2:239149300..239149321,- | |||
|coexpression_cluster_id=C150 | |coexpression_cluster_id=C150 | ||
|description=CAGE_peak_2_at_HES6_5end | |description=CAGE_peak_2_at_HES6_5end | ||
|id=chr2:239149300..239149321,- | |id=chr2:239149300..239149321,- | ||
|ontology_enrichment_celltype=CL:0000123;4.96e-32;2!CL:0000242;4.96e-32;2!CL:0002319;2.76e-14;25!CL:0000312;1.91e-13;5!CL:0000095;2.41e-13;17!CL:0000240;2.30e-11;6!CL:0000311;2.30e-11;6!CL:0000079;2.30e-11;6!CL:0000237;2.30e-11;6!CL:0000047;6.93e-09;2!CL:0000362;7.13e-08;9 | |ontology_enrichment_celltype=CL:0002319!3.45e-16!25;CL:0000133!7.06e-15!59;CL:0000047!2.28e-12!8;CL:0000221!9.03e-12!71;CL:0000540!9.33e-11!6;CL:0000031!9.33e-11!6;CL:0000404!9.33e-11!6;CL:0000242!1.06e-09!2;CL:0000333!3.86e-09!41;CL:0002322!1.78e-07!5;CL:0000095!2.10e-07!17;CL:0000123!2.10e-07!17 | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;4.96e-32;2!CL:0000242;4.96e-32;2!CL:0002319;2.76e-14;25!CL:0000312;1.91e-13;5!CL:0000095;2.41e-13;17!CL:0000240;2.30e-11;6!CL:0000311;2.30e-11;6!CL:0000079;2.30e-11;6!CL:0000237;2.30e-11;6!CL:0000047;6.93e-09;2!CL:0000362;7.13e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.37e-32,2;CL:0002319,2.57e-14,25;CL:0000312,1.97e-13,5;CL:0000095,2.30e-13,17;CL:0000123,2.30e-13,17;CL:0000240,2.36e-11,6;CL:0000311,2.36e-11,6;CL:0000079,2.36e-11,6;CL:0000237,2.36e-11,6;CL:0000036,2.36e-11,6;CL:0000357,2.36e-11,6;CL:0000114,2.36e-11,6;CL:0000333,5.51e-09,41;CL:0000133,7.65e-09,59;CL:0000362,7.25e-08,9;CL:0000221,3.08e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;2.30e-11;6!CL:0000114;2.30e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001950;4.14e-07;20 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.95e-07!94;UBERON:0001016!6.95e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.14e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.22e-07,89;UBERON:0001950,4.51e-07,20 | |||
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| ||
|short_description=p2@HES6 | |short_description=p2@HES6 | ||
}} | }} |
Latest revision as of 05:40, 16 September 2015
Short description: | p2@HES6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HES6_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | 0bp_to_ENST00000436051_5end |
EntrezGene: | HES6 |
HGNC: | 18254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HES6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.37e-32 | 2 |
neural cell | 2.57e-14 | 25 |
keratinocyte | 1.97e-13 | 5 |
neuron associated cell | 2.30e-13 | 17 |
neuron associated cell (sensu Vertebrata) | 2.30e-13 | 17 |
stratified squamous epithelial cell | 2.36e-11 | 6 |
keratin accumulating cell | 2.36e-11 | 6 |
stratified epithelial cell | 2.36e-11 | 6 |
keratinizing barrier epithelial cell | 2.36e-11 | 6 |
epithelial fate stem cell | 2.36e-11 | 6 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 1.22e-07 | 89 |
neocortex | 4.51e-07 | 20 |
Showing 1 to 2 of 2 entries