FFCP PHASE1:Hg19::chr2:239047304..239047335,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=377007 | |EntrezGene=377007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24770 | |HGNC=24770 | ||
|TSSclassifier=strong | |||
|UniProt=Q0D2K2 | |UniProt=Q0D2K2 | ||
|association_with_transcript=-27bp_to_ENST00000305959,ENST00000409223,NM_198582_5end | |association_with_transcript=-27bp_to_ENST00000305959,ENST00000409223,NM_198582_5end | ||
|cluster_id=chr2:239047304..239047335,+ | |||
|coexpression_cluster_id=C72 | |coexpression_cluster_id=C72 | ||
|description=CAGE_peak_1_at_KLHL30_5end | |description=CAGE_peak_1_at_KLHL30_5end | ||
|id=chr2:239047304..239047335,+ | |id=chr2:239047304..239047335,+ | ||
|ontology_enrichment_celltype=CL:0002586;4.78e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002586;4.78e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001134;1.31e-14;16!UBERON:0002036;1.31e-14;16!UBERON:0007100;1.26e-08;25!UBERON:0004151;1.20e-07;3!UBERON:0003978;1.30e-07;3!UBERON:0000946;1.30e-07;3!UBERON:0002385;1.61e-07;31!UBERON:0001015;1.61e-07;31!UBERON:0000383;1.61e-07;31!UBERON:0001781;4.78e-07;3!UBERON:0001782;4.78e-07;3!UBERON:0000966;7.04e-07;5!UBERON:0005388;7.04e-07;5!UBERON:0001802;7.04e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.50e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-14;16!UBERON:0002036;1.31e-14;16!UBERON:0007100;1.26e-08;25!UBERON:0004151;1.20e-07;3!UBERON:0003978;1.30e-07;3!UBERON:0000946;1.30e-07;3!UBERON:0002385;1.61e-07;31!UBERON:0001015;1.61e-07;31!UBERON:0000383;1.61e-07;31!UBERON:0001781;4.78e-07;3!UBERON:0001782;4.78e-07;3!UBERON:0000966;7.04e-07;5!UBERON:0005388;7.04e-07;5!UBERON:0001802;7.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.99e-08,68;UBERON:0007023,2.82e-08,114;UBERON:0007100,9.08e-08,27;UBERON:0003978,1.07e-07,3;UBERON:0009751,1.07e-07,3;UBERON:0004151,1.07e-07,3;UBERON:0000946,1.07e-07,3;UBERON:0002523,1.07e-07,3;UBERON:0005983,1.07e-07,3;UBERON:0002165,1.07e-07,3;UBERON:0002062,1.07e-07,3;UBERON:0007280,1.07e-07,3;UBERON:0001782,4.76e-07,3;UBERON:0005424,4.76e-07,3 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,2.00146596706261,1.78784437770915,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.56740831967947,0,0.257575567634187,0.581592955118259,0.377875943688809,0,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.673971786878971,0.750884464207532,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0.087834785693126,0.785874452986276,0,0,0.324547393654683,0,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,1.2333377420858,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,1.25572744982203,0.427114777637135,0,0,0,1.28820270022815,0.37223371266318,0,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0.168584690078102,0,0.330881918197182,0,0,0.404493924480493,0,0,0,0,0,2.94017422771084,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,2.21595305478658,0.702012795417713,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,1.88215698667853,1.02738161275192,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0.178428988797162,0.788512075169673,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,11.3237329857582,0,0,0,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,1.35359883872224,0.385076685522074,1.56869953835371,0,1.26661954671451,0,0,0,0,0.270946437543853,0.501689773854853,0,1.66215201785745,1.11937377361089,0,0,1.28225062558195,2.62411716559765,4.22991913063594,0.103041011647722,4.8531816353722,6.35323149388527,0,0,0,1.06337790121334,0.770243085573222,0.460511024178389,2.48105830472155,0,0.725083469571143,1.70453254832202,12.197388883603,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,1.01455188481352,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83261613921294,0,1.22896305723383,1.11838053946208,2.16903884225481,4.68931428964897,0,0,0,0,0,0,5.12778627451629,0,0,0,0.23874448473769,0,0,0,0,0,0,0,12.3533752715663,0.828851746593443,0,0.613612095012929,0,1.24415835064723,0,0,0,2.17015492401254,0,0,0,0.0927680981618513,0,0.260427761085233,0,2.17499872630438,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0.10893846351899,0,1.84680620409113,0,1.38338342632836,1.70539524378567,1.3037684630641,0.638002319463839,0.549585560411174,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0.269604531922708,8.82835412028668,0,0.91227394607833,0.19566461893209,0,0.394584402849391,0,0,0.695052375913368,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0.173559738335131,0,0,1.57254001417827,0,0,0,0,1.55182426381471,0,0.451961481561065,0,0,0.189932387867636,0.195551382734803,0,1.06726497369676,0.799238438328521,0.288180834308212,0,0,0,0.745515213392595,0,1.08723364858891,1.882851233622,0,0.288950589901519,0,0,0,0,0,5.58564802544508,6.64565229633883,2.87149209830726,4.5926170114768,9.87219910714113,5.35611497860494,9.67442003808858,2.88239906833923,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0.524545881349981,0,0,0,5.00286728461357,7.94510364438518,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,3.26410682021684,9.77690586688531,7.65863941908654,0,0,0,0,0,0,0.221858103073705,0.683060432355218,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,6.0004164699473,0,0.336749488765919,16.4040367697246,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0.352675943690684,1.2249819094128,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,3.1826595538604,0.676892955143315,0,0,1.30953347240711,0,0.443568258651136,0.135075169236789,0,0,0.0634158101939068,0,0,12.4052794597324,0,0.127762427639595,0,0,0,0,0.887023701626388,0.115233987555779,0.171488009437418,0.135939465953663,0.197318320688547,0,0,2.04082041411336,0,0,0,0,0,1.07214816264985,0,0,1.04314963381548,0,0,0,0,0.430227358820278,0,0,0.423387050190929,1.14553434272025,0,0,1.34226518157351,0,0,23.9548669759521,48.4568448361486,15.0775876073966,1.45713297917742,0,0,0,0,0.109940516745429,0,0.308696632431779,0.218559560503957,4.23285566725371,2.45148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,1.83491713361816,0.286679166302903,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0.126166424835079,0,1.39368351112581,0.407955318967927,0,0.18378979906969,0.250707539292375,0.909344378618873,0,0,0,10.4484651131481,1.66645102024618,0,0,0.112131862580613,1.0820016907288,0.808468755832877,6.53150243690884,9.92476573147315,0.336760265072938,0.860666464712116,1.99596213927608,0,0,0,0.359300808426348,7.03922827210363,1.58913877437726,0,1.99727032255654,2.21401172950129,0 | |phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,2.00146596706261,1.78784437770915,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,1.56740831967947,0,0.257575567634187,0.581592955118259,0.377875943688809,0,0,0.822335776043652,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.673971786878971,0.750884464207532,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0.087834785693126,0.785874452986276,0,0,0.324547393654683,0,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,1.2333377420858,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,1.25572744982203,0.427114777637135,0,0,0,1.28820270022815,0.37223371266318,0,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0.168584690078102,0,0.330881918197182,0,0,0.404493924480493,0,0,0,0,0,2.94017422771084,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,2.21595305478658,0.702012795417713,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12750493267896,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,1.88215698667853,1.02738161275192,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0.178428988797162,0.788512075169673,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,11.3237329857582,0,0,0,0,0,0,0.744323423456331,1.07423381301644,0.280660094433074,0.640695746278505,0,0.64341568457443,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,1.35359883872224,0.385076685522074,1.56869953835371,0,1.26661954671451,0,0,0,0,0.270946437543853,0.501689773854853,0,1.66215201785745,1.11937377361089,0,0,1.28225062558195,2.62411716559765,4.22991913063594,0.103041011647722,4.8531816353722,6.35323149388527,0,0,0,1.06337790121334,0.770243085573222,0.460511024178389,2.48105830472155,0,0.725083469571143,1.70453254832202,12.197388883603,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,1.01455188481352,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,2.04383492638291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83261613921294,0,1.22896305723383,1.11838053946208,2.16903884225481,4.68931428964897,0,0,0,0,0,0,5.12778627451629,0,0,0,0.23874448473769,0,0,0,0,0,0,0,12.3533752715663,0.828851746593443,0,0.613612095012929,0,1.24415835064723,0,0,0,2.17015492401254,0,0,0,0.0927680981618513,0,0.260427761085233,0,2.17499872630438,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0.10893846351899,0,1.84680620409113,0,1.38338342632836,1.70539524378567,1.3037684630641,0.638002319463839,0.549585560411174,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0.269604531922708,8.82835412028668,0,0.91227394607833,0.19566461893209,0,0.394584402849391,0,0,0.695052375913368,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0.173559738335131,0,0,1.57254001417827,0,0,0,0,1.55182426381471,0,0.451961481561065,0,0,0.189932387867636,0.195551382734803,0,1.06726497369676,0.799238438328521,0.288180834308212,0,0,0,0.745515213392595,0,1.08723364858891,1.882851233622,0,0.288950589901519,0,0,0,0,0,5.58564802544508,6.64565229633883,2.87149209830726,4.5926170114768,9.87219910714113,5.35611497860494,9.67442003808858,2.88239906833923,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0.524545881349981,0,0,0,5.00286728461357,7.94510364438518,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,3.26410682021684,9.77690586688531,7.65863941908654,0,0,0,0,0,0,0.221858103073705,0.683060432355218,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,6.0004164699473,0,0.336749488765919,16.4040367697246,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0.352675943690684,1.2249819094128,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,3.1826595538604,0.676892955143315,0,0,1.30953347240711,0,0.443568258651136,0.135075169236789,0,0,0.0634158101939068,0,0,12.4052794597324,0,0.127762427639595,0,0,0,0,0.887023701626388,0.115233987555779,0.171488009437418,0.135939465953663,0.197318320688547,0,0,2.04082041411336,0,0,0,0,0,1.07214816264985,0,0,1.04314963381548,0,0,0,0,0.430227358820278,0,0,0.423387050190929,1.14553434272025,0,0,1.34226518157351,0,0,23.9548669759521,48.4568448361486,15.0775876073966,1.45713297917742,0,0,0,0,0.109940516745429,0,0.308696632431779,0.218559560503957,4.23285566725371,2.45148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,1.83491713361816,0.286679166302903,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0.126166424835079,0,1.39368351112581,0.407955318967927,0,0.18378979906969,0.250707539292375,0.909344378618873,0,0,0,10.4484651131481,1.66645102024618,0,0,0.112131862580613,1.0820016907288,0.808468755832877,6.53150243690884,9.92476573147315,0.336760265072938,0.860666464712116,1.99596213927608,0,0,0,0.359300808426348,7.03922827210363,1.58913877437726,0,1.99727032255654,2.21401172950129,0 | ||
|short_description=p1@KLHL30 | |short_description=p1@KLHL30 | ||
}} | }} |
Latest revision as of 05:29, 16 September 2015
Short description: | p1@KLHL30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL30_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -27bp_to_ENST00000305959, ENST00000409223, NM_198582_5end |
EntrezGene: | KLHL30 |
HGNC: | 24770 |
UniProt: | Q0D2K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
compound organ | 1.99e-08 | 68 |
adult organism | 2.82e-08 | 114 |
primary circulatory organ | 9.08e-08 | 27 |
valve | 1.07e-07 | 3 |
cardiac mesenchyme | 1.07e-07 | 3 |
cardiac chamber | 1.07e-07 | 3 |
cardial valve | 1.07e-07 | 3 |
tunica intima | 1.07e-07 | 3 |
heart layer | 1.07e-07 | 3 |
endocardium | 1.07e-07 | 3 |
endocardial cushion | 1.07e-07 | 3 |
presumptive endocardium | 1.07e-07 | 3 |
pigmented layer of retina | 4.76e-07 | 3 |
presumptive retinal pigmented epithelium | 4.76e-07 | 3 |