FFCP PHASE1:Hg19::chr2:238933960..238933968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140739 | |EntrezGene=140739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12480 | |HGNC=12480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000482096_5end | |association_with_transcript=-11bp_to_ENST00000482096_5end | ||
|cluster_id=chr2:238933960..238933968,+ | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_9_at_UBE2F_5end | |description=CAGE_peak_9_at_UBE2F_5end | ||
|id=chr2:238933960..238933968,+ | |id=chr2:238933960..238933968,+ | ||
|ontology_enrichment_celltype=CL:0002621!8.34e-13!3;CL:0002159!3.59e-11!13;CL:0000362!1.62e-10!8;CL:0000864!3.10e-10!1;CL:0000091!3.10e-10!1;CL:0000312!6.31e-08!5;CL:0000453!6.77e-08!5;CL:0000240!9.69e-07!6;CL:0000311!9.69e-07!6;CL:0000079!9.69e-07!6;CL:0000237!9.69e-07!6;CL:0000036!9.69e-07!6;CL:0000357!9.69e-07!6;CL:0000114!9.69e-07!6 | |ontology_enrichment_celltype=CL:0002621!8.34e-13!3;CL:0002159!3.59e-11!13;CL:0000362!1.62e-10!8;CL:0000864!3.10e-10!1;CL:0000091!3.10e-10!1;CL:0000312!6.31e-08!5;CL:0000453!6.77e-08!5;CL:0000240!9.69e-07!6;CL:0000311!9.69e-07!6;CL:0000079!9.69e-07!6;CL:0000237!9.69e-07!6;CL:0000036!9.69e-07!6;CL:0000357!9.69e-07!6;CL:0000114!9.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002166;5.96e-34;3!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.96e-34,3;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!3.10e-10!1 | |ontology_enrichment_disease=DOID:3571!3.10e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.39e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0001949!8.34e-13!3;UBERON:0006834!6.33e-10!1;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1 | |ontology_enrichment_uberon=UBERON:0001949!8.34e-13!3;UBERON:0006834!6.33e-10!1;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.14e-26;4!UBERON:0008895;7.14e-26;4!UBERON:0011159;5.15e-21;5!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.14e-26,4;UBERON:0008895,7.14e-26,4;UBERON:0011159,5.15e-21,5;UBERON:0010188,9.07e-18,6;UBERON:0002539,9.07e-18,6;UBERON:0008816,9.07e-18,6;UBERON:0010323,2.37e-10,11;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p9@UBE2F | |short_description=p9@UBE2F | ||
}} | }} |
Latest revision as of 05:22, 16 September 2015
Short description: | p9@UBE2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UBE2F_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | -11bp_to_ENST00000482096_5end |
EntrezGene: | UBE2F |
HGNC: | 12480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.96e-34 | 3 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 7.14e-26 | 4 |
splanchnocranium | 7.14e-26 | 4 |
primary subdivision of cranial skeletal system | 5.15e-21 | 5 |
protuberance | 9.07e-18 | 6 |
pharyngeal arch | 9.07e-18 | 6 |
embryonic head | 9.07e-18 | 6 |
cranial skeletal system | 2.37e-10 | 11 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.39e-14 | 8 |