FFCP PHASE1:Hg19::chr2:238933920..238933935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140739 | |EntrezGene=140739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12480 | |HGNC=12480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000480828_5end | |association_with_transcript=18bp_to_ENST00000480828_5end | ||
|cluster_id=chr2:238933920..238933935,+ | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_7_at_UBE2F_5end | |description=CAGE_peak_7_at_UBE2F_5end | ||
|id=chr2:238933920..238933935,+ | |id=chr2:238933920..238933935,+ | ||
|ontology_enrichment_celltype=CL:0002159!7.20e-18!13;CL:0002621!9.85e-16!3;CL:0002166!1.46e-15!3;CL:0000317!2.12e-11!2;CL:1000448!2.12e-11!2;CL:0002308!2.12e-11!2;CL:0002140!2.12e-11!2;CL:0000362!3.79e-10!8;CL:0002582!6.39e-07!3 | |ontology_enrichment_celltype=CL:0002159!7.20e-18!13;CL:0002621!9.85e-16!3;CL:0002166!1.46e-15!3;CL:0000317!2.12e-11!2;CL:1000448!2.12e-11!2;CL:0002308!2.12e-11!2;CL:0002140!2.12e-11!2;CL:0000362!3.79e-10!8;CL:0002582!6.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;6.61e-50;2!CL:1000448;6.61e-50;2!CL:0002308;6.61e-50;2!CL:0002140;6.61e-50;2!CL:0000622;1.10e-20;5!CL:0000154;2.01e-17;6!CL:0002159;1.26e-16;14!CL:0000150;5.83e-12;9!CL:0000362;5.83e-12;9!CL:0002166;1.10e-09;3!CL:0002621;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.15e-50,2;CL:1000448,5.15e-50,2;CL:0002308,5.15e-50,2;CL:0002140,5.15e-50,2;CL:0000622,9.93e-21,5;CL:0000154,1.85e-17,6;CL:0002159,1.20e-16,14;CL:0000150,5.52e-12,9;CL:0000362,5.52e-12,9;CL:0002166,1.10e-09,3;CL:0002621,1.41e-09,3;CL:0002077,3.02e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.95e-12!14 | |ontology_enrichment_disease=DOID:2394!4.95e-12!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!9.85e-16!3;UBERON:0001708!8.54e-12!4;UBERON:0001704!8.54e-12!4;UBERON:0002419!2.12e-11!2;UBERON:0007771!2.12e-11!2;UBERON:0003297!2.12e-11!2;UBERON:0001821!2.12e-11!2;UBERON:0003487!2.12e-11!2;UBERON:0001820!2.12e-11!2;UBERON:0005089!2.12e-11!2;UBERON:0005088!2.12e-11!2;UBERON:0002090!5.24e-08!6;UBERON:0003129!3.12e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.61e-50;2!UBERON:0007771;6.61e-50;2!UBERON:0003297;6.61e-50;2!UBERON:0001821;6.61e-50;2!UBERON:0003487;6.61e-50;2!UBERON:0001820;6.61e-50;2!UBERON:0001949;1.47e-09;3!UBERON:0010371;1.07e-07;31!UBERON:0001708;1.40e-07;4!UBERON:0008895;1.40e-07;4!UBERON:0001003;1.49e-07;15!UBERON:0007376;1.49e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.15e-50,2;UBERON:0007771,5.15e-50,2;UBERON:0003297,5.15e-50,2;UBERON:0001821,5.15e-50,2;UBERON:0003487,5.15e-50,2;UBERON:0001820,5.15e-50,2;UBERON:0005089,5.15e-50,2;UBERON:0005088,5.15e-50,2;UBERON:0001949,1.41e-09,3;UBERON:0001708,1.40e-07,4;UBERON:0008895,1.40e-07,4;UBERON:0001003,1.44e-07,15;UBERON:0007376,1.44e-07,15;UBERON:0007383,1.44e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,17.8061055890791,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77854608371035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0,1.18151612746737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,17.8061055890791,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77854608371035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0,1.18151612746737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@UBE2F | |short_description=p7@UBE2F | ||
}} | }} |
Latest revision as of 05:21, 16 September 2015
Short description: | p7@UBE2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UBE2F_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 18bp_to_ENST00000480828_5end |
EntrezGene: | UBE2F |
HGNC: | 12480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.15e-50 | 2 |
epithelial cell of sweat gland | 5.15e-50 | 2 |
epithelial cell of skin gland | 5.15e-50 | 2 |
acinar cell of sebaceous gland | 5.15e-50 | 2 |
acinar cell | 9.93e-21 | 5 |
protein secreting cell | 1.85e-17 | 6 |
general ecto-epithelial cell | 1.20e-16 | 14 |
glandular epithelial cell | 5.52e-12 | 9 |
epidermal cell | 5.52e-12 | 9 |
epithelial cell of Malassez | 1.10e-09 | 3 |
gingival epithelial cell | 1.41e-09 | 3 |
ecto-epithelial cell | 3.02e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.15e-50 | 2 |
epidermis gland | 5.15e-50 | 2 |
gland of integumental system | 5.15e-50 | 2 |
sebaceous gland | 5.15e-50 | 2 |
skin sebaceous gland | 5.15e-50 | 2 |
sweat gland | 5.15e-50 | 2 |
sweat gland placode | 5.15e-50 | 2 |
sebaceous gland placode | 5.15e-50 | 2 |
gingival epithelium | 1.41e-09 | 3 |
jaw skeleton | 1.40e-07 | 4 |
splanchnocranium | 1.40e-07 | 4 |
skin epidermis | 1.44e-07 | 15 |
outer epithelium | 1.44e-07 | 15 |
enveloping layer of ectoderm | 1.44e-07 | 15 |