FFCP PHASE1:Hg19::chr2:106776562..106776573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80146 | |EntrezGene=80146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17729 | |HGNC=17729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479774_5end | |||
|cluster_id=chr2:106776562..106776573,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_7_at_UXS1_5end | |||
|id=chr2:106776562..106776573,- | |||
|ontology_enrichment_celltype=CL:0000791!4.27e-22!18;CL:0000789!4.27e-22!18;CL:0002420!4.27e-22!18;CL:0002419!4.27e-22!18;CL:0000790!4.27e-22!18;CL:0000838!1.33e-17!52;CL:0000542!3.73e-17!53;CL:0000051!3.73e-17!53;CL:0000084!3.73e-17!25;CL:0000827!3.73e-17!25;CL:0000624!3.43e-15!6;CL:0000625!2.82e-11!11;CL:0000898!7.45e-09!3;CL:0002087!7.32e-08!119;CL:0000842!1.19e-07!3;CL:0000738!4.99e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.73e-28;11!CL:0000791;3.22e-28;18!CL:0000789;3.22e-28;18!CL:0002419;3.22e-28;18!CL:0000084;6.43e-20;25!CL:0000815;1.10e-14;2!CL:0000792;1.10e-14;2!CL:0002677;1.10e-14;2!CL:0000898;4.39e-10;3!CL:0000542;3.88e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.28e-28,11;CL:0000791,2.54e-28,18;CL:0000789,2.54e-28,18;CL:0002420,2.54e-28,18;CL:0002419,2.54e-28,18;CL:0000790,2.54e-28,18;CL:0000084,5.43e-20,25;CL:0000827,5.43e-20,25;CL:0000815,9.02e-15,2;CL:0000792,9.02e-15,2;CL:0002677,9.02e-15,2;CL:0000838,3.02e-13,52;CL:0000542,5.86e-13,53;CL:0000051,5.86e-13,53;CL:0000898,3.84e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.22e-28;18!CL:0000051;3.88e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.56e-12!15;UBERON:0000179!5.56e-12!15;UBERON:0000463!5.56e-12!15;UBERON:0001950!5.84e-11!20;UBERON:0001893!6.70e-11!34;UBERON:0001869!3.21e-10!32;UBERON:0007023!6.56e-10!115;UBERON:0002780!8.38e-10!41;UBERON:0001890!8.38e-10!41;UBERON:0006240!8.38e-10!41;UBERON:0002619!8.39e-10!22;UBERON:0000200!9.96e-10!6;UBERON:0002791!1.11e-09!33;UBERON:0003080!1.73e-09!42;UBERON:0000956!2.09e-08!25;UBERON:0000203!2.09e-08!25;UBERON:0002020!5.38e-08!34;UBERON:0003528!5.38e-08!34;UBERON:0002771!1.19e-07!3;UBERON:0001871!4.26e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-07;15!UBERON:0000179;3.66e-07;15!UBERON:0000463;3.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.46e-07,15;UBERON:0000179,4.46e-07,15;UBERON:0000463,4.46e-07,15 | |||
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| ||
|short_description=p7@UXS1 | |||
}} | }} |
Latest revision as of 05:08, 16 September 2015
Short description: | p7@UXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UXS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000479774_5end |
EntrezGene: | UXS1 |
HGNC: | 17729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.28e-28 | 11 |
mature alpha-beta T cell | 2.54e-28 | 18 |
alpha-beta T cell | 2.54e-28 | 18 |
immature T cell | 2.54e-28 | 18 |
mature T cell | 2.54e-28 | 18 |
immature alpha-beta T cell | 2.54e-28 | 18 |
T cell | 5.43e-20 | 25 |
pro-T cell | 5.43e-20 | 25 |
regulatory T cell | 9.02e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.02e-15 | 2 |
naive regulatory T cell | 9.02e-15 | 2 |
lymphoid lineage restricted progenitor cell | 3.02e-13 | 52 |
lymphocyte | 5.86e-13 | 53 |
common lymphoid progenitor | 5.86e-13 | 53 |
naive T cell | 3.84e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.46e-07 | 15 |
haemolymphatic fluid | 4.46e-07 | 15 |
organism substance | 4.46e-07 | 15 |