FFCP PHASE1:Hg19::chrX:65384012..65384023,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9843 | |EntrezGene=9843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |HGNC=4866 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQS7 | |UniProt=Q9BQS7 | ||
|association_with_transcript=-55bp_to_NM_001130860_5end | |association_with_transcript=-55bp_to_NM_001130860_5end | ||
|cluster_id=chrX:65384012..65384023,+ | |||
|description=CAGE_peak_10_at_HEPH_5end | |description=CAGE_peak_10_at_HEPH_5end | ||
|id=chrX:65384012..65384023,+ | |id=chrX:65384012..65384023,+ | ||
|ontology_enrichment_celltype=CL:0000393!6.56e-07!60;CL:0000211!6.56e-07!60 | |ontology_enrichment_celltype=CL:0000393!6.56e-07!60;CL:0000211!6.56e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.97e-19;1!UBERON:0004140;2.97e-19;1 | |ontology_enrichment_development_v019=UBERON:0010227;2.97e-19;1!UBERON:0004140;2.97e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.96e-36;8!DOID:8692;2.98e-15;31!DOID:1240;9.19e-10;39!DOID:0060084;2.71e-07;3!DOID:127;2.71e-07;3 | |ontology_enrichment_disease_v019=DOID:1036;1.96e-36;8!DOID:8692;2.98e-15;31!DOID:1240;9.19e-10;39!DOID:0060084;2.71e-07;3!DOID:127;2.71e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.58e-36,8;DOID:8692,1.00e-14,31;DOID:1240,9.97e-12,39;DOID:2531,5.56e-09,51;DOID:0060083,5.56e-09,51;DOID:0060084,2.19e-07,3;DOID:127,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007100!2.18e-09!27;UBERON:0007023!6.68e-08!115;UBERON:0003075!1.41e-07!86;UBERON:0007284!1.41e-07!86;UBERON:0000948!4.53e-07!24;UBERON:0005498!4.53e-07!24;UBERON:0004140!4.53e-07!24;UBERON:0009881!4.53e-07!24;UBERON:0004141!4.53e-07!24;UBERON:0003084!4.53e-07!24;UBERON:0007005!4.53e-07!24;UBERON:0004139!4.53e-07!24;UBERON:0004291!4.53e-07!24;UBERON:0002118!5.16e-07!5;UBERON:0004532!5.16e-07!5;UBERON:0002346!6.89e-07!90 | |ontology_enrichment_uberon=UBERON:0007100!2.18e-09!27;UBERON:0007023!6.68e-08!115;UBERON:0003075!1.41e-07!86;UBERON:0007284!1.41e-07!86;UBERON:0000948!4.53e-07!24;UBERON:0005498!4.53e-07!24;UBERON:0004140!4.53e-07!24;UBERON:0009881!4.53e-07!24;UBERON:0004141!4.53e-07!24;UBERON:0003084!4.53e-07!24;UBERON:0007005!4.53e-07!24;UBERON:0004139!4.53e-07!24;UBERON:0004291!4.53e-07!24;UBERON:0002118!5.16e-07!5;UBERON:0004532!5.16e-07!5;UBERON:0002346!6.89e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.97e-19;1!UBERON:0002081;2.60e-10;2!UBERON:0000948;5.72e-08;22!UBERON:0004151;2.71e-07;3!UBERON:0007100;4.45e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002079;2.97e-19;1!UBERON:0002081;2.60e-10;2!UBERON:0000948;5.72e-08;22!UBERON:0004151;2.71e-07;3!UBERON:0007100;4.45e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.25e-19,1;UBERON:0002081,2.27e-10,2;UBERON:0010227,2.27e-10,2;UBERON:0000948,2.20e-07,24;UBERON:0005498,2.20e-07,24;UBERON:0004140,2.20e-07,24;UBERON:0009881,2.20e-07,24;UBERON:0004141,2.20e-07,24;UBERON:0003084,2.20e-07,24;UBERON:0007005,2.20e-07,24;UBERON:0004139,2.20e-07,24;UBERON:0004291,2.20e-07,24;UBERON:0004151,2.47e-07,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0.24666754841716,1.24484414159907,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0.366390373607449,0,0,0,0,1.35357396370308,2.35275041181287,1.1747511088309,0.948768663620925,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.687481272035051,0,0.199679000498991,0.429226048136571,0.223171457441873,1.61240333968143,0,0,0,0,0,0,0,0,0,0.643012593860077,0.825236619583403,0.415440338029185,0,0,0.182248669974074,0,0,0.367182116944987,0,0,0,1.42939065274673,0,0,1.62899880526114,0,0,0,2.38068310173083,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,0.280272163313789,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0.24666754841716,1.24484414159907,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0.366390373607449,0,0,0,0,1.35357396370308,2.35275041181287,1.1747511088309,0.948768663620925,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.687481272035051,0,0.199679000498991,0.429226048136571,0.223171457441873,1.61240333968143,0,0,0,0,0,0,0,0,0,0.643012593860077,0.825236619583403,0.415440338029185,0,0,0.182248669974074,0,0,0.367182116944987,0,0,0,1.42939065274673,0,0,1.62899880526114,0,0,0,2.38068310173083,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,0.280272163313789,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | ||
|short_description=p10@HEPH | |short_description=p10@HEPH | ||
}} | }} |
Latest revision as of 05:03, 16 September 2015
Short description: | p10@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HEPH_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_NM_001130860_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | Q9BQS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.25e-19 | 1 |
cardiac atrium | 2.27e-10 | 2 |
future cardiac atrium | 2.27e-10 | 2 |
heart | 2.20e-07 | 24 |
primitive heart tube | 2.20e-07 | 24 |
primary heart field | 2.20e-07 | 24 |
anterior lateral plate mesoderm | 2.20e-07 | 24 |
heart tube | 2.20e-07 | 24 |
heart primordium | 2.20e-07 | 24 |
cardiac mesoderm | 2.20e-07 | 24 |
cardiogenic plate | 2.20e-07 | 24 |
heart rudiment | 2.20e-07 | 24 |
cardiac chamber | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.58e-36 | 8 |
myeloid leukemia | 1.00e-14 | 31 |
leukemia | 9.97e-12 | 39 |
hematologic cancer | 5.56e-09 | 51 |
immune system cancer | 5.56e-09 | 51 |
cell type benign neoplasm | 2.19e-07 | 3 |
leiomyoma | 2.19e-07 | 3 |