FFCP PHASE1:Hg19::chr16:29911864..29911967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253982 | |EntrezGene=253982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27380 | |HGNC=27380 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000483405_5end | |association_with_transcript=164bp_to_ENST00000483405_5end | ||
|cluster_id=chr16:29911864..29911967,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_ASPHD1_5end | |description=CAGE_peak_1_at_ASPHD1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!7.43e-17!180;CL:0000192!1.71e-09!42;CL:0000514!1.71e-09!42;CL:0000183!3.03e-09!59;CL:0000393!3.10e-09!60;CL:0000211!3.10e-09!60;CL:0000680!3.62e-09!57;CL:0000056!3.62e-09!57;CL:0000355!3.62e-09!57;CL:0000187!4.34e-09!54;CL:0000359!4.52e-09!32;CL:0000057!8.15e-08!75;CL:0000220!8.44e-08!246;CL:0002321!9.25e-08!248 | |ontology_enrichment_celltype=CL:0000055!7.43e-17!180;CL:0000192!1.71e-09!42;CL:0000514!1.71e-09!42;CL:0000183!3.03e-09!59;CL:0000393!3.10e-09!60;CL:0000211!3.10e-09!60;CL:0000680!3.62e-09!57;CL:0000056!3.62e-09!57;CL:0000355!3.62e-09!57;CL:0000187!4.34e-09!54;CL:0000359!4.52e-09!32;CL:0000057!8.15e-08!75;CL:0000220!8.44e-08!246;CL:0002321!9.25e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.50e-09;32!CL:0000192;9.17e-08;43 | |ontology_enrichment_celltype_v019=CL:0000359;3.50e-09;32!CL:0000192;9.17e-08;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.22e-10,43;CL:0000514,3.22e-10,43;CL:0000359,8.85e-10,32;CL:0000680,1.14e-09,58;CL:0000056,1.14e-09,58;CL:0000355,1.14e-09,58;CL:0000187,1.39e-09,55;CL:0000393,1.74e-09,61;CL:0000211,1.74e-09,61;CL:0002321,7.84e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;9.17e-08;43 | |ontology_enrichment_development_v019=CL:0000514;9.17e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.70e-27!365;UBERON:0000073!4.29e-27!94;UBERON:0001016!4.29e-27!94;UBERON:0005743!2.72e-26!86;UBERON:0001017!8.83e-25!82;UBERON:0001049!1.89e-24!57;UBERON:0005068!1.89e-24!57;UBERON:0006241!1.89e-24!57;UBERON:0007135!1.89e-24!57;UBERON:0000025!6.55e-24!194;UBERON:0000483!9.56e-24!309;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0000481!3.66e-23!347;UBERON:0000119!1.14e-22!312;UBERON:0003075!1.79e-22!86;UBERON:0007284!1.79e-22!86;UBERON:0002780!2.52e-21!41;UBERON:0001890!2.52e-21!41;UBERON:0006240!2.52e-21!41;UBERON:0002616!3.24e-21!59;UBERON:0003080!1.01e-20!42;UBERON:0002346!2.38e-20!90;UBERON:0003056!2.31e-19!61;UBERON:0000033!1.96e-18!123;UBERON:0004111!1.73e-17!241;UBERON:0001893!2.57e-17!34;UBERON:0002020!2.67e-17!34;UBERON:0003528!2.67e-17!34;UBERON:0000477!6.58e-17!286;UBERON:0002791!1.14e-16!33;UBERON:0004121!1.49e-16!169;UBERON:0001869!3.99e-16!32;UBERON:0000153!8.18e-16!129;UBERON:0007811!8.18e-16!129;UBERON:0000924!1.94e-15!173;UBERON:0006601!1.94e-15!173;UBERON:0000467!3.75e-14!625;UBERON:0000480!7.06e-14!626;UBERON:0000468!5.12e-13!659;UBERON:0000922!5.14e-13!612;UBERON:0002619!5.25e-13!22;UBERON:0000923!7.39e-13!604;UBERON:0005291!7.39e-13!604;UBERON:0006598!7.39e-13!604;UBERON:0002532!7.39e-13!604;UBERON:0002050!8.84e-13!605;UBERON:0005423!8.84e-13!605;UBERON:0000062!8.02e-12!511;UBERON:0001950!1.10e-11!20;UBERON:0000956!1.44e-11!25;UBERON:0000203!1.44e-11!25;UBERON:0005256!1.03e-09!143;UBERON:0000064!7.02e-09!219;UBERON:0000914!4.20e-08!83;UBERON:0002329!4.20e-08!83;UBERON:0003077!4.20e-08!83;UBERON:0003059!4.20e-08!83;UBERON:0007282!4.20e-08!83;UBERON:0009618!4.20e-08!83;UBERON:0007285!4.20e-08!83;UBERON:0003104!4.96e-08!238;UBERON:0009142!4.96e-08!238;UBERON:0002100!1.14e-07!216;UBERON:0002420!1.68e-07!9;UBERON:0007245!1.68e-07!9;UBERON:0010009!1.68e-07!9;UBERON:0010011!1.68e-07!9;UBERON:0000454!1.68e-07!9;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0001134!1.92e-07!61;UBERON:0002036!1.92e-07!61;UBERON:0003082!1.92e-07!61;UBERON:0000486!2.01e-07!82;UBERON:0004290!3.60e-07!70;UBERON:0002385!9.07e-07!63;UBERON:0001015!9.07e-07!63;UBERON:0000383!9.07e-07!63 | |ontology_enrichment_uberon=UBERON:0000475!1.70e-27!365;UBERON:0000073!4.29e-27!94;UBERON:0001016!4.29e-27!94;UBERON:0005743!2.72e-26!86;UBERON:0001017!8.83e-25!82;UBERON:0001049!1.89e-24!57;UBERON:0005068!1.89e-24!57;UBERON:0006241!1.89e-24!57;UBERON:0007135!1.89e-24!57;UBERON:0000025!6.55e-24!194;UBERON:0000483!9.56e-24!309;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0000481!3.66e-23!347;UBERON:0000119!1.14e-22!312;UBERON:0003075!1.79e-22!86;UBERON:0007284!1.79e-22!86;UBERON:0002780!2.52e-21!41;UBERON:0001890!2.52e-21!41;UBERON:0006240!2.52e-21!41;UBERON:0002616!3.24e-21!59;UBERON:0003080!1.01e-20!42;UBERON:0002346!2.38e-20!90;UBERON:0003056!2.31e-19!61;UBERON:0000033!1.96e-18!123;UBERON:0004111!1.73e-17!241;UBERON:0001893!2.57e-17!34;UBERON:0002020!2.67e-17!34;UBERON:0003528!2.67e-17!34;UBERON:0000477!6.58e-17!286;UBERON:0002791!1.14e-16!33;UBERON:0004121!1.49e-16!169;UBERON:0001869!3.99e-16!32;UBERON:0000153!8.18e-16!129;UBERON:0007811!8.18e-16!129;UBERON:0000924!1.94e-15!173;UBERON:0006601!1.94e-15!173;UBERON:0000467!3.75e-14!625;UBERON:0000480!7.06e-14!626;UBERON:0000468!5.12e-13!659;UBERON:0000922!5.14e-13!612;UBERON:0002619!5.25e-13!22;UBERON:0000923!7.39e-13!604;UBERON:0005291!7.39e-13!604;UBERON:0006598!7.39e-13!604;UBERON:0002532!7.39e-13!604;UBERON:0002050!8.84e-13!605;UBERON:0005423!8.84e-13!605;UBERON:0000062!8.02e-12!511;UBERON:0001950!1.10e-11!20;UBERON:0000956!1.44e-11!25;UBERON:0000203!1.44e-11!25;UBERON:0005256!1.03e-09!143;UBERON:0000064!7.02e-09!219;UBERON:0000914!4.20e-08!83;UBERON:0002329!4.20e-08!83;UBERON:0003077!4.20e-08!83;UBERON:0003059!4.20e-08!83;UBERON:0007282!4.20e-08!83;UBERON:0009618!4.20e-08!83;UBERON:0007285!4.20e-08!83;UBERON:0003104!4.96e-08!238;UBERON:0009142!4.96e-08!238;UBERON:0002100!1.14e-07!216;UBERON:0002420!1.68e-07!9;UBERON:0007245!1.68e-07!9;UBERON:0010009!1.68e-07!9;UBERON:0010011!1.68e-07!9;UBERON:0000454!1.68e-07!9;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0001134!1.92e-07!61;UBERON:0002036!1.92e-07!61;UBERON:0003082!1.92e-07!61;UBERON:0000486!2.01e-07!82;UBERON:0004290!3.60e-07!70;UBERON:0002385!9.07e-07!63;UBERON:0001015!9.07e-07!63;UBERON:0000383!9.07e-07!63 | ||
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| ||
|short_description=p1@ASPHD1 | |short_description=p1@ASPHD1 | ||
}} | }} |
Latest revision as of 05:01, 16 September 2015
Short description: | p1@ASPHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASPHD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 164bp_to_ENST00000483405_5end |
EntrezGene: | ASPHD1 |
HGNC: | 27380 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.22e-10 | 43 |
smooth muscle myoblast | 3.22e-10 | 43 |
vascular associated smooth muscle cell | 8.85e-10 | 32 |
muscle precursor cell | 1.14e-09 | 58 |
myoblast | 1.14e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-09 | 58 |
muscle cell | 1.39e-09 | 55 |
electrically responsive cell | 1.74e-09 | 61 |
electrically active cell | 1.74e-09 | 61 |
embryonic cell | 7.84e-07 | 250 |