FFCP PHASE1:Hg19::chr5:149829294..149829310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6208 | |EntrezGene=6208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10387 | |HGNC=10387 | ||
|TSSclassifier=strong | |||
|UniProt=P62263 | |UniProt=P62263 | ||
|association_with_transcript=0bp_to_ENST00000401695_5end | |association_with_transcript=0bp_to_ENST00000401695_5end | ||
|cluster_id=chr5:149829294..149829310,- | |||
|coexpression_cluster_id=C4341 | |||
|description=CAGE_peak_1_at_RPS14_5end | |description=CAGE_peak_1_at_RPS14_5end | ||
|id=chr5:149829294..149829310,- | |id=chr5:149829294..149829310,- | ||
|ontology_enrichment_celltype=CL:0000012!5.37e-16!682;CL:0000003!7.47e-16!722;CL:0000548!1.33e-14!679;CL:0000004!1.33e-14!679;CL:0000255!1.33e-14!679;CL:0000838!5.63e-14!52;CL:0000542!7.53e-14!53;CL:0000051!7.53e-14!53;CL:0000144!7.19e-13!625;CL:0002371!5.86e-11!591;CL:0000183!4.86e-09!59;CL:0000791!8.51e-09!18;CL:0000789!8.51e-09!18;CL:0002420!8.51e-09!18;CL:0002419!8.51e-09!18;CL:0000790!8.51e-09!18;CL:0000084!5.76e-08!25;CL:0000827!5.76e-08!25;CL:0000187!7.41e-08!54;CL:0000393!1.25e-07!60;CL:0000211!1.25e-07!60;CL:0000680!1.53e-07!57;CL:0000056!1.53e-07!57;CL:0000355!1.53e-07!57;CL:0000945!5.82e-07!24;CL:0000826!5.82e-07!24;CL:0000192!6.54e-07!42;CL:0000514!6.54e-07!42 | |ontology_enrichment_celltype=CL:0000012!5.37e-16!682;CL:0000003!7.47e-16!722;CL:0000548!1.33e-14!679;CL:0000004!1.33e-14!679;CL:0000255!1.33e-14!679;CL:0000838!5.63e-14!52;CL:0000542!7.53e-14!53;CL:0000051!7.53e-14!53;CL:0000144!7.19e-13!625;CL:0002371!5.86e-11!591;CL:0000183!4.86e-09!59;CL:0000791!8.51e-09!18;CL:0000789!8.51e-09!18;CL:0002420!8.51e-09!18;CL:0002419!8.51e-09!18;CL:0000790!8.51e-09!18;CL:0000084!5.76e-08!25;CL:0000827!5.76e-08!25;CL:0000187!7.41e-08!54;CL:0000393!1.25e-07!60;CL:0000211!1.25e-07!60;CL:0000680!1.53e-07!57;CL:0000056!1.53e-07!57;CL:0000355!1.53e-07!57;CL:0000945!5.82e-07!24;CL:0000826!5.82e-07!24;CL:0000192!6.54e-07!42;CL:0000514!6.54e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.07e-09;53!CL:0000791;8.31e-09;18!CL:0000789;8.31e-09;18!CL:0002419;8.31e-09;18!CL:0000084;5.72e-08;25!CL:0000945;6.10e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.63e-14,52;CL:0000542,7.53e-14,53;CL:0000051,7.53e-14,53;CL:0000791,8.51e-09,18;CL:0000789,8.51e-09,18;CL:0002420,8.51e-09,18;CL:0002419,8.51e-09,18;CL:0000790,8.51e-09,18;CL:0000084,5.76e-08,25;CL:0000827,5.76e-08,25;CL:0000187,2.42e-07,55;CL:0000393,3.72e-07,61;CL:0000211,3.72e-07,61;CL:0000680,4.66e-07,58;CL:0000056,4.66e-07,58;CL:0000355,4.66e-07,58;CL:0000945,5.82e-07,24;CL:0000826,5.82e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;6.07e-09;53!CL:0000790;8.31e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.09e-08!82;UBERON:0004290!1.53e-07!70;UBERON:0001134!2.32e-07!61;UBERON:0002036!2.32e-07!61;UBERON:0003082!2.32e-07!61;UBERON:0002385!7.55e-07!63;UBERON:0001015!7.55e-07!63;UBERON:0000383!7.55e-07!63 | |ontology_enrichment_uberon=UBERON:0000486!5.09e-08!82;UBERON:0004290!1.53e-07!70;UBERON:0001134!2.32e-07!61;UBERON:0002036!2.32e-07!61;UBERON:0003082!2.32e-07!61;UBERON:0002385!7.55e-07!63;UBERON:0001015!7.55e-07!63;UBERON:0000383!7.55e-07!63 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.32e-07,83;UBERON:0007503,1.63e-07,78;UBERON:0002329,4.13e-07,71;UBERON:0003059,4.13e-07,71;UBERON:0007282,4.13e-07,71;UBERON:0004290,4.13e-07,71;UBERON:0009618,4.13e-07,71;UBERON:0001134,6.66e-07,62;UBERON:0002036,6.66e-07,62;UBERON:0003082,6.66e-07,62;UBERON:0007524,9.11e-07,73 | |||
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| ||
|short_description=p1@RPS14 | |short_description=p1@RPS14 | ||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p1@RPS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS14_5end |
Coexpression cluster: | C4341_CD8_CD4_CD133_CD19_CD34_skeletal_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000401695_5end |
EntrezGene: | RPS14 |
HGNC: | 10387 |
UniProt: | P62263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.63e-14 | 52 |
lymphocyte | 7.53e-14 | 53 |
common lymphoid progenitor | 7.53e-14 | 53 |
mature alpha-beta T cell | 8.51e-09 | 18 |
alpha-beta T cell | 8.51e-09 | 18 |
immature T cell | 8.51e-09 | 18 |
mature T cell | 8.51e-09 | 18 |
immature alpha-beta T cell | 8.51e-09 | 18 |
T cell | 5.76e-08 | 25 |
pro-T cell | 5.76e-08 | 25 |
muscle cell | 2.42e-07 | 55 |
electrically responsive cell | 3.72e-07 | 61 |
electrically active cell | 3.72e-07 | 61 |
muscle precursor cell | 4.66e-07 | 58 |
myoblast | 4.66e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.66e-07 | 58 |
lymphocyte of B lineage | 5.82e-07 | 24 |
pro-B cell | 5.82e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.32e-07 | 83 |
epithelial vesicle | 1.63e-07 | 78 |
somite | 4.13e-07 | 71 |
presomitic mesoderm | 4.13e-07 | 71 |
presumptive segmental plate | 4.13e-07 | 71 |
dermomyotome | 4.13e-07 | 71 |
trunk paraxial mesoderm | 4.13e-07 | 71 |
skeletal muscle tissue | 6.66e-07 | 62 |
striated muscle tissue | 6.66e-07 | 62 |
myotome | 6.66e-07 | 62 |
dense mesenchyme tissue | 9.11e-07 | 73 |