FFCP PHASE1:Hg19::chr8:12808720..12808732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:12808720..12808732,+
|short_description=p19@KIAA1456
|description=CAGE_peak_19_at_KIAA1456_5end
|association_with_transcript=-105bp_to_ENST00000528335_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_ENST00000528335_5end | |||
|cluster_id=chr8:12808720..12808732,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_19_at_KIAA1456_5end | |||
|id=chr8:12808720..12808732,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.72e-27;5!CL:0002321;8.10e-10;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.56e-27!10;DOID:3095!3.00e-12!22;DOID:2994!3.00e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.29e-117;10!DOID:3095;6.24e-54;22!DOID:2994;6.24e-54;22!DOID:169;6.07e-23;6!DOID:3193;7.67e-18;2!DOID:962;7.67e-18;2!DOID:1192;2.31e-12;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.29e-117,10;DOID:3095,6.24e-54,22;DOID:2994,6.24e-54,22;DOID:169,6.07e-23,6;DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:1192,2.31e-12,3;DOID:0050687,1.02e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.04e-28!90;UBERON:0001049!5.87e-22!57;UBERON:0005068!5.87e-22!57;UBERON:0006241!5.87e-22!57;UBERON:0007135!5.87e-22!57;UBERON:0002616!3.85e-21!59;UBERON:0000073!4.31e-21!94;UBERON:0001016!4.31e-21!94;UBERON:0002020!3.97e-19!34;UBERON:0003528!3.97e-19!34;UBERON:0003075!2.22e-18!86;UBERON:0007284!2.22e-18!86;UBERON:0005743!3.89e-18!86;UBERON:0000955!1.81e-17!69;UBERON:0006238!1.81e-17!69;UBERON:0000369!3.40e-17!4;UBERON:0002435!3.40e-17!4;UBERON:0000204!3.40e-17!4;UBERON:0010082!3.40e-17!4;UBERON:0001017!1.09e-16!82;UBERON:0001869!1.76e-16!32;UBERON:0000924!1.85e-16!173;UBERON:0006601!1.85e-16!173;UBERON:0002791!5.89e-16!33;UBERON:0002780!1.20e-15!41;UBERON:0001890!1.20e-15!41;UBERON:0006240!1.20e-15!41;UBERON:0001893!1.84e-15!34;UBERON:0003080!3.03e-15!42;UBERON:0007023!4.64e-15!115;UBERON:0002308!2.60e-13!9;UBERON:0000125!2.60e-13!9;UBERON:0002680!2.69e-13!9;UBERON:0001895!2.69e-13!9;UBERON:0010092!2.69e-13!9;UBERON:0003056!3.01e-12!61;UBERON:0001950!5.95e-12!20;UBERON:0002619!7.15e-11!22;UBERON:0002771!1.03e-10!3;UBERON:0005383!1.03e-10!3;UBERON:0005382!1.03e-10!3;UBERON:0000988!1.46e-10!3;UBERON:0004121!1.99e-10!169;UBERON:0000033!2.86e-10!123;UBERON:0009663!4.62e-10!7;UBERON:0004733!5.13e-10!12;UBERON:0002028!5.13e-10!12;UBERON:0007277!5.13e-10!12;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000956!1.46e-09!25;UBERON:0000203!1.46e-09!25;UBERON:0004732!2.95e-09!13;UBERON:0001882!7.18e-09!1;UBERON:0005403!7.18e-09!1;UBERON:0001874!9.74e-09!1;UBERON:0002902!1.91e-08!1;UBERON:0009899!1.91e-08!1;UBERON:0002022!2.22e-08!1;UBERON:0003076!4.86e-08!15;UBERON:0003057!4.86e-08!15;UBERON:0002420!6.23e-08!9;UBERON:0007245!6.23e-08!9;UBERON:0010009!6.23e-08!9;UBERON:0010011!6.23e-08!9;UBERON:0000454!6.23e-08!9;UBERON:0000013!3.77e-07!5;UBERON:0002410!3.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.07e-130;4!UBERON:0000923;1.07e-130;4!UBERON:0010316;1.07e-130;4!UBERON:0005291;1.07e-130;4!UBERON:0002050;8.85e-105;5!UBERON:0005423;8.85e-105;5!UBERON:0000013;2.72e-27;5!UBERON:0002410;2.72e-27;5!UBERON:0003714;7.67e-18;2!UBERON:0000010;1.13e-15;8!UBERON:0000922;6.43e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.72e-27,5;UBERON:0002410,2.72e-27,5;UBERON:0003714,7.67e-18,2;UBERON:0000010,1.13e-15,8;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
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|short_description=p19@KIAA1456 | |||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p19@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_KIAA1456_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -105bp_to_ENST00000528335_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.72e-27 | 5 |
autonomic nervous system | 2.72e-27 | 5 |
neural tissue | 7.67e-18 | 2 |
peripheral nervous system | 1.13e-15 | 8 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.29e-117 | 10 |
germ cell and embryonal cancer | 6.24e-54 | 22 |
germ cell cancer | 6.24e-54 | 22 |
neuroendocrine tumor | 6.07e-23 | 6 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |
cell type cancer | 1.02e-08 | 143 |