FFCP PHASE1:Hg19::chr8:12808701..12808712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-125bp_to_ENST00000528335_5end | |||
|cluster_id=chr8:12808701..12808712,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_16_at_KIAA1456_5end | |||
|id=chr8:12808701..12808712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.35e-21;5!CL:0002321;1.31e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.17e-18!10;DOID:3095!4.07e-08!22;DOID:2994!4.07e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.43e-88;10!DOID:3095;1.63e-40;22!DOID:2994;1.63e-40;22!DOID:169;1.44e-17;6!DOID:3193;8.82e-14;2!DOID:962;8.82e-14;2!DOID:1192;1.24e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.43e-88,10;DOID:3095,1.63e-40,22;DOID:2994,1.63e-40,22;DOID:169,1.44e-17,6;DOID:3193,8.28e-14,2;DOID:962,8.28e-14,2;DOID:1192,1.19e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001893!3.53e-46!34;UBERON:0002619!2.58e-45!22;UBERON:0001869!3.32e-44!32;UBERON:0001950!2.24e-43!20;UBERON:0002791!8.99e-43!33;UBERON:0000956!1.07e-39!25;UBERON:0000203!1.07e-39!25;UBERON:0001049!2.08e-39!57;UBERON:0005068!2.08e-39!57;UBERON:0006241!2.08e-39!57;UBERON:0007135!2.08e-39!57;UBERON:0002780!9.34e-38!41;UBERON:0001890!9.34e-38!41;UBERON:0006240!9.34e-38!41;UBERON:0002020!5.78e-37!34;UBERON:0003528!5.78e-37!34;UBERON:0003080!8.91e-37!42;UBERON:0002346!1.56e-36!90;UBERON:0002616!2.11e-34!59;UBERON:0000955!4.39e-31!69;UBERON:0006238!4.39e-31!69;UBERON:0000073!5.51e-31!94;UBERON:0001016!5.51e-31!94;UBERON:0001017!9.74e-31!82;UBERON:0005743!4.39e-29!86;UBERON:0003075!5.72e-27!86;UBERON:0007284!5.72e-27!86;UBERON:0003056!3.57e-24!61;UBERON:0000924!3.51e-22!173;UBERON:0006601!3.51e-22!173;UBERON:0000200!2.57e-20!6;UBERON:0007023!4.41e-17!115;UBERON:0001872!1.67e-16!5;UBERON:0004121!2.92e-16!169;UBERON:0000153!5.19e-16!129;UBERON:0007811!5.19e-16!129;UBERON:0002771!9.00e-16!3;UBERON:0001871!1.61e-15!7;UBERON:0000033!2.06e-15!123;UBERON:0002021!1.21e-09!5;UBERON:0000025!4.40e-09!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.37e-98;4!UBERON:0000923;1.37e-98;4!UBERON:0010316;1.37e-98;4!UBERON:0005291;1.37e-98;4!UBERON:0002050;4.75e-79;5!UBERON:0005423;4.75e-79;5!UBERON:0000013;7.35e-21;5!UBERON:0002410;7.35e-21;5!UBERON:0003714;8.82e-14;2!UBERON:0000010;4.67e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.35e-21,5;UBERON:0002410,7.35e-21,5;UBERON:0003714,8.28e-14,2;UBERON:0000010,4.67e-12,8;UBERON:0002346,2.39e-07,86;UBERON:0004121,5.76e-07,171;UBERON:0000924,5.76e-07,171;UBERON:0006601,5.76e-07,171 | |||
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|short_description=p16@KIAA1456 | |||
}} | }} |
Latest revision as of 04:51, 16 September 2015
Short description: | p16@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_KIAA1456_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -125bp_to_ENST00000528335_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.35e-21 | 5 |
autonomic nervous system | 7.35e-21 | 5 |
neural tissue | 8.28e-14 | 2 |
peripheral nervous system | 4.67e-12 | 8 |
neurectoderm | 2.39e-07 | 86 |
ectoderm-derived structure | 5.76e-07 | 171 |
ectoderm | 5.76e-07 | 171 |
presumptive ectoderm | 5.76e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.43e-88 | 10 |
germ cell and embryonal cancer | 1.63e-40 | 22 |
germ cell cancer | 1.63e-40 | 22 |
neuroendocrine tumor | 1.44e-17 | 6 |
peripheral nerve sheath neoplasm | 8.28e-14 | 2 |
neurofibroma | 8.28e-14 | 2 |
peripheral nervous system neoplasm | 1.19e-09 | 3 |