FFCP PHASE1:Hg19::chr20:387885..387896,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:387885..387896,+
|short_description=p11@RBCK1
|description=CAGE_peak_11_at_RBCK1_5end
|association_with_transcript=-245bp_to_ENST00000411647_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10616 | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15864 | |HGNC=15864 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JWR1 | |UniProt=Q5JWR1 | ||
|association_with_transcript=-245bp_to_ENST00000411647_5end | |||
|cluster_id=chr20:387885..387896,+ | |||
|description=CAGE_peak_11_at_RBCK1_5end | |||
|id=chr20:387885..387896,+ | |||
|ontology_enrichment_celltype=CL:0000223!3.28e-22!59;CL:0000066!3.65e-16!254;CL:0000181!2.80e-12!12;CL:0000417!2.80e-12!12;CL:0000668!2.80e-12!12;CL:0000414!2.80e-12!12;CL:0000412!2.80e-12!12;CL:0000182!2.80e-12!12;CL:0002178!4.21e-10!3;CL:0002076!1.82e-09!43;CL:0000083!3.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000167;4.66e-21;1!CL:0000164;4.66e-21;1!CL:0000502;4.66e-21;1!CL:0000172;4.66e-21;1!CL:0000173;4.66e-21;1!CL:0000307;4.68e-08;3!CL:0002577;6.56e-08;3!CL:0002231;6.56e-08;3!CL:0002178;6.56e-08;3!CL:0000182;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.31e-21,1;CL:0000164,6.31e-21,1;CL:0000502,6.31e-21,1;CL:0000172,6.31e-21,1;CL:0000173,6.31e-21,1;CL:0002351,6.31e-21,1;CL:0000223,3.16e-12,58;CL:0000068,4.84e-08,3;CL:0000069,4.84e-08,3;CL:0000307,4.84e-08,3;CL:0000377,4.84e-08,3;CL:0002577,5.54e-08,3;CL:0002178,5.93e-08,3;CL:0002076,6.60e-08,42;CL:0002231,8.29e-08,3;CL:0000182,1.47e-07,12;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002351;4.66e-21;1!CL:0000377;4.68e-08;3!CL:0000223;5.18e-08;58 | |||
|ontology_enrichment_disease=DOID:0050687!4.48e-19!143;DOID:305!1.44e-18!106;DOID:162!6.09e-13!235;DOID:14566!1.83e-12!239;DOID:299!1.59e-10!25;DOID:7!1.47e-07!39;DOID:1793!3.06e-07!4;DOID:4074!4.28e-07!2;DOID:4905!4.28e-07!2;DOID:3498!4.28e-07!2;DOID:4929!5.83e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.66e-21;1!DOID:3493;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.31e-21,1;DOID:3493,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.05e-10!25;UBERON:0000015!1.05e-10!25;UBERON:0002423!1.05e-10!25;UBERON:0006235!1.05e-10!25;UBERON:0004161!1.05e-10!25;UBERON:0004119!1.38e-10!169;UBERON:0000925!1.38e-10!169;UBERON:0006595!1.38e-10!169;UBERON:0008835!3.26e-10!22;UBERON:0003894!3.26e-10!22;UBERON:0000077!1.04e-09!130;UBERON:0009854!1.08e-09!23;UBERON:0004921!1.22e-09!129;UBERON:0004185!1.22e-09!129;UBERON:0002107!1.48e-09!19;UBERON:0006925!1.48e-09!19;UBERON:0008836!1.48e-09!19;UBERON:0001041!7.37e-09!98;UBERON:0007499!8.87e-09!25;UBERON:0001007!1.67e-08!155;UBERON:0001555!1.67e-08!155;UBERON:0007026!1.67e-08!155;UBERON:0009856!2.25e-08!26;UBERON:0005911!5.96e-08!82;UBERON:0005177!1.03e-07!107;UBERON:0003929!6.02e-07!54;UBERON:0002365!9.12e-07!31;UBERON:0002330!9.12e-07!31 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p11@RBCK1 | |||
}} | }} |
Latest revision as of 04:49, 16 September 2015
Short description: | p11@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RBCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -245bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.31e-21 | 1 |
enteroendocrine cell | 6.31e-21 | 1 |
type D enteroendocrine cell | 6.31e-21 | 1 |
somatostatin secreting cell | 6.31e-21 | 1 |
pancreatic D cell | 6.31e-21 | 1 |
progenitor cell of endocrine pancreas | 6.31e-21 | 1 |
endodermal cell | 3.16e-12 | 58 |
duct epithelial cell | 4.84e-08 | 3 |
branched duct epithelial cell | 4.84e-08 | 3 |
tracheal epithelial cell | 4.84e-08 | 3 |
tracheoblast | 4.84e-08 | 3 |
placental epithelial cell | 5.54e-08 | 3 |
epithelial cell of stomach | 5.93e-08 | 3 |
endo-epithelial cell | 6.60e-08 | 42 |
epithelial cell of prostate | 8.29e-08 | 3 |
hepatocyte | 1.47e-07 | 12 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.31e-21 | 1 |
signet ring cell adenocarcinoma | 2.73e-11 | 2 |