FFCP PHASE1:Hg19::chr3:154797843..154797858,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=strong | |||
|UniProt=P08473 | |||
|association_with_transcript=-24bp_to_ENST00000462745_5end | |||
|cluster_id=chr3:154797843..154797858,+ | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_15_at_MME_5end | |||
|id=chr3:154797843..154797858,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.97e-24!180;CL:0000057!4.94e-18!75;CL:0002620!4.14e-13!23;CL:0000136!5.29e-12!15;CL:0000680!7.93e-08!57;CL:0000056!7.93e-08!57;CL:0000355!7.93e-08!57;CL:0000325!1.18e-07!39;CL:0000048!6.31e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.12e-26;13!CL:0002521;9.19e-09;3!CL:0000188;9.52e-09;9!CL:0002615;1.73e-08;3!CL:0000680;1.93e-08;7!CL:0000594;5.60e-08;3!CL:0002620;1.51e-07;23!CL:0002580;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.72e-23,15;CL:0000188,8.65e-09,9;CL:0002521,9.47e-09,3;CL:0002615,1.80e-08,3;CL:0000057,2.86e-08,76;CL:0000594,4.94e-08,3;CL:0000048,6.98e-08,427;CL:0000723,1.46e-07,433;CL:0002620,1.82e-07,23;CL:0002580,2.17e-07,3;CL:0000034,3.75e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!2.20e-13!45;UBERON:0002416!2.20e-13!45;UBERON:0003102!4.28e-12!95;UBERON:0000914!7.50e-12!83;UBERON:0002329!7.50e-12!83;UBERON:0003077!7.50e-12!83;UBERON:0003059!7.50e-12!83;UBERON:0007282!7.50e-12!83;UBERON:0009618!7.50e-12!83;UBERON:0007285!7.50e-12!83;UBERON:0004290!3.73e-11!70;UBERON:0002097!4.31e-10!40;UBERON:0000486!5.96e-09!82;UBERON:0000475!7.92e-09!365;UBERON:0002100!2.14e-08!216;UBERON:0002385!2.74e-08!63;UBERON:0001015!2.74e-08!63;UBERON:0000383!2.74e-08!63;UBERON:0005256!4.75e-08!143;UBERON:0001134!5.44e-08!61;UBERON:0002036!5.44e-08!61;UBERON:0003082!5.44e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.04e-09;31!UBERON:0001015;3.04e-09;31!UBERON:0000383;3.04e-09;31!UBERON:0002190;9.19e-09;3!UBERON:0001134;5.21e-08;16!UBERON:0002036;5.21e-08;16!UBERON:0000310;1.07e-07;10!UBERON:0002199;3.71e-07;46!UBERON:0002416;3.71e-07;46!UBERON:0003688;6.24e-07;6!UBERON:0002358;6.24e-07;6!UBERON:0003684;6.24e-07;6!UBERON:0001178;6.24e-07;6!UBERON:0001443;6.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.09e-09,46;UBERON:0002416,6.09e-09,46;UBERON:0002329,7.63e-09,71;UBERON:0003059,7.63e-09,71;UBERON:0007282,7.63e-09,71;UBERON:0004290,7.63e-09,71;UBERON:0009618,7.63e-09,71;UBERON:0002190,9.47e-09,3;UBERON:0003077,1.19e-08,72;UBERON:0007285,1.19e-08,72;UBERON:0007524,1.84e-08,73;UBERON:0000310,6.38e-08,10;UBERON:0007503,1.34e-07,78;UBERON:0001443,3.95e-07,11;UBERON:0003688,6.86e-07,6;UBERON:0002358,6.86e-07,6;UBERON:0003684,6.86e-07,6;UBERON:0001178,6.86e-07,6;UBERON:0000486,7.57e-07,83 | |||
|phase1_expression=1.81678379270557,50.955924686054,3.24195129420734,11.0080628188443,10.7270662662549,0,25.3299878168311,6.31719873426831,28.4692334737824,0,0,0,0,0,0,2.6893005858071,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.32409180813219,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0,0,0.234321431833797,5.30672130611545,1.71141546463335,3.43731965269142,0.939475989150119,1.45685649931318,0.702254033511242,0.408308342509787,0.245668634623536,0.826606249406124,7.12801714369232,1.23633464639278,0,0,0.673344455816265,0.250237039743928,2.21651292387346,1.31693286264251,0.612975591598039,2.70428506031874,0.113432183160021,0.89694817844431,1.92201649936711,0.635795703478686,0,0.103052529238439,1.03056216018252,1.11670113798954,1.0126579934476,2.04617710838517,0.252433774244115,0.368199594569197,1.2931684545505,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,9.75172648867156,20.934504968418,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,1.39695367442772,0.381988425558278,0,3.4214489204541,0.205654985406647,2.10240140490742,0.285826432630578,0,0,0,0.129271715757778,7.15312891703765,0,0.797814349754612,1.04007436911366,0,1.41849132023278,0.266422179016099,0.428933980974443,6.51145926469732,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,1.59259437334337,0.410952645100767,8.0577433457953,0,0,0,0,0,0,0,0,0,0,0,1.65766205374414,0.12269149171914,0,0,0,0,0.315404830067869,0.117141414992713,4.51419149591578,2.27407504055985,1.03473071292505,0,0.553107505625109,4.69171518127647,0,0,0,0,0,0,0,0,1.73675465473144,1.38115775959256,3.92924132206303,0.256278298511402,2.04682899626681,0,0,0.154209693802656,0.887808626565635,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.574072240823034,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,1.44257416306811,0,0.165018999841176,0,0,0,0.290012154876366,1.54048617114644,3.53058451870098,1.24052915236078,7.41199689591088,9.86113518616754,1.44885266607372,0.178064071293475,0,0,0,0,0,1.5740617341532,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,1.14378116354295,0.511795582622668,2.56763392820352,0,0,2.15846949099978,2.19629623788844,0.353437207037059,0.404364963146632,0,0,0,0.487426979262569,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,4.30234056612155,7.56517615801033,0,0,0.211107635297664,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,8.94469120453958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68826173670061,0.121360521749513,0,0,0.47748896947538,0,0,0,0,1.22439575525196,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.89999830173917,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,1.99052386215701,5.57282656371037,3.05515072466813,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,3.62972148145992,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0.124252535565433,0,0.951329442515298,0.104602846312333,0.203996435272644,0,0,0,0,0,0,1.39641200636127,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65491985328316,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.58620893471233,0,0,0,0,0,0.320362237703084,0,0.828478110694391,0.992332043623902,0,0,0,9.79232046065053,10.2782856549307,15.9299699917,25.9019378260745,0.314108192500469,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.856396000634902,0,0,0,0,1.16856654923612,0,1.7046270474758,3.0188148210309,0,0.686520205190771,0.151230923763239,0.15543720058278,0.73927574994817,0.159296767163702,4.49803112163605,0.155262956876259,0.829412415681711,0.53168342911599,0,0.150257608997218,0,0,0.545545977607678,0,0.928067519756987,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0,1.54339208493677,0.135939465953663,0,0,0,0.156986185701028,0,0.280272163313789,0,0.863710364874486,0,0.0714765441766563,0,0,0.1738582723025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| |||
|short_description=p15@MME | |||
}} |
Latest revision as of 04:47, 16 September 2015
Short description: | p15@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MME_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | -24bp_to_ENST00000462745_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.72e-23 | 15 |
cell of skeletal muscle | 8.65e-09 | 9 |
subcutaneous fat cell | 9.47e-09 | 3 |
adipocyte of omentum tissue | 1.80e-08 | 3 |
fibroblast | 2.86e-08 | 76 |
skeletal muscle satellite cell | 4.94e-08 | 3 |
multi fate stem cell | 6.98e-08 | 427 |
somatic stem cell | 1.46e-07 | 433 |
skin fibroblast | 1.82e-07 | 23 |
preadipocyte of the breast | 2.17e-07 | 3 |
stem cell | 3.75e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
integument | 6.09e-09 | 46 |
integumental system | 6.09e-09 | 46 |
somite | 7.63e-09 | 71 |
presomitic mesoderm | 7.63e-09 | 71 |
presumptive segmental plate | 7.63e-09 | 71 |
dermomyotome | 7.63e-09 | 71 |
trunk paraxial mesoderm | 7.63e-09 | 71 |
subcutaneous adipose tissue | 9.47e-09 | 3 |
paraxial mesoderm | 1.19e-08 | 72 |
presumptive paraxial mesoderm | 1.19e-08 | 72 |
dense mesenchyme tissue | 1.84e-08 | 73 |
breast | 6.38e-08 | 10 |
epithelial vesicle | 1.34e-07 | 78 |
chest | 3.95e-07 | 11 |
omentum | 6.86e-07 | 6 |
peritoneum | 6.86e-07 | 6 |
abdominal cavity | 6.86e-07 | 6 |
visceral peritoneum | 6.86e-07 | 6 |
multilaminar epithelium | 7.57e-07 | 83 |