FFCP PHASE1:Hg19::chr14:76842634..76842646,+: Difference between revisions
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|id=chr14:76842634..76842646,+
|short_description=p5@ESRRB
|description=CAGE_peak_5_at_ESRRB_5end
|association_with_transcript=-53bp_to_ENST00000507951_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2103 | |EntrezGene=2103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3473 | |HGNC=3473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000507951_5end | |||
|cluster_id=chr14:76842634..76842646,+ | |||
|coexpression_cluster_id=C2311 | |||
|description=CAGE_peak_5_at_ESRRB_5end | |||
|id=chr14:76842634..76842646,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.70e-21;2!CL:0000242;5.70e-21;2!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.70e-21,2;CL:0000312,3.22e-09,5;CL:0000240,6.78e-08,6;CL:0000311,6.78e-08,6;CL:0000079,6.78e-08,6;CL:0000237,6.78e-08,6;CL:0000036,6.78e-08,6;CL:0000357,6.78e-08,6;CL:0000114,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3!CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:171!3.89e-15!10;DOID:3095!5.78e-07!22;DOID:2994!5.78e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;7.51e-17;10!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.51e-17,10;DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.56e-27!3;UBERON:0004854!5.56e-27!3;UBERON:0009034!5.56e-27!3;UBERON:0002095!5.56e-27!3;UBERON:0004782!5.56e-27!3;UBERON:0003281!5.56e-27!3;UBERON:0009664!5.56e-27!3;UBERON:0002296!5.56e-27!3;UBERON:0005602!5.56e-27!3;UBERON:0001179!5.56e-27!3;UBERON:0006293!5.56e-27!3;UBERON:0004177!6.28e-12!7;UBERON:0000945!1.66e-10!8;UBERON:0010039!1.66e-10!8;UBERON:0002336!3.96e-10!1;UBERON:0001018!3.96e-10!1;UBERON:0002473!3.96e-10!1;UBERON:0005340!3.96e-10!1;UBERON:0002316!3.96e-10!1;UBERON:0003544!3.96e-10!1;UBERON:0001020!3.96e-10!1;UBERON:0005970!3.96e-10!1;UBERON:0002437!3.96e-10!1;UBERON:0004457!3.58e-07!12;UBERON:0000042!3.58e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.71e-40;4!UBERON:0000923;2.71e-40;4!UBERON:0010316;2.71e-40;4!UBERON:0005291;2.71e-40;4!UBERON:0002050;1.70e-32;5!UBERON:0005423;1.70e-32;5!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.37e-08,21;UBERON:0002104,1.37e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24 | |||
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|short_description=p5@ESRRB | |||
}} | }} |
Latest revision as of 04:41, 16 September 2015
Short description: | p5@ESRRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ESRRB_5end |
Coexpression cluster: | C2311_neuroectodermal_eye_retina_neuroepithelioma_merkel_carcinoid_neuroblastoma |
Association with transcript: | -53bp_to_ENST00000507951_5end |
EntrezGene: | ESRRB |
HGNC: | 3473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.70e-21 | 2 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.51e-17 | 10 |
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |