FFCP PHASE1:Hg19::chr10:105726862..105726986,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9748 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11088 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2G2 | |||
|association_with_transcript=0bp_to_ENST00000335753,ENST00000369755_5end | |||
|cluster_id=chr10:105726862..105726986,+ | |||
|description=CAGE_peak_1_at_SLK_5end | |||
|id=chr10:105726862..105726986,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.65e-16!76;CL:0002057!1.22e-14!42;CL:0000860!1.33e-14!45;CL:0000557!2.20e-14!71;CL:0000839!2.78e-13!70;CL:0002009!2.63e-12!65;CL:0002194!1.94e-11!63;CL:0000576!1.94e-11!63;CL:0000040!1.94e-11!63;CL:0000559!1.94e-11!63;CL:0000763!3.71e-10!112;CL:0000049!3.71e-10!112;CL:0000738!8.98e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-14;33!CL:0002057;3.29e-14;33!CL:0000473;2.61e-10;39!CL:0000234;2.61e-10;39!CL:0000576;3.75e-09;48!CL:0000766;2.97e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.72e-15,72;CL:0000860,1.22e-14,42;CL:0002057,1.22e-14,42;CL:0000557,5.69e-14,67;CL:0000839,7.30e-13,66;CL:0000473,1.02e-12,48;CL:0000234,1.02e-12,48;CL:0002009,6.83e-12,61;CL:0002194,5.06e-11,59;CL:0000576,5.06e-11,59;CL:0000040,5.06e-11,59;CL:0000559,5.06e-11,59;CL:0000763,1.05e-09,108;CL:0000049,1.05e-09,108;CL:0000738,2.30e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.61e-18!115;UBERON:0000062!5.75e-13!511;UBERON:0002390!5.08e-11!102;UBERON:0003061!5.08e-11!102;UBERON:0004765!5.35e-11!101;UBERON:0001434!5.35e-11!101;UBERON:0002371!6.29e-11!80;UBERON:0001474!3.42e-10!86;UBERON:0002193!8.06e-10!112;UBERON:0000165!3.52e-07!28;UBERON:0000930!3.52e-07!28;UBERON:0000153!6.12e-07!129;UBERON:0007811!6.12e-07!129;UBERON:0000467!8.79e-07!625;UBERON:0000480!8.83e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.15e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.59e-18,114;UBERON:0002390,1.46e-10,98;UBERON:0003061,1.46e-10,98;UBERON:0002371,1.75e-10,76;UBERON:0001434,2.39e-10,100;UBERON:0001474,9.58e-10,82;UBERON:0004765,1.39e-09,90;UBERON:0002193,2.26e-09,108;UBERON:0002405,2.44e-08,93 | |||
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| |||
|short_description=p1@SLK | |||
}} |
Latest revision as of 04:38, 16 September 2015
Short description: | p1@SLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335753, ENST00000369755_5end |
EntrezGene: | SLK |
HGNC: | 11088 |
UniProt: | Q9H2G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.72e-15 | 72 |
classical monocyte | 1.22e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-14 | 42 |
granulocyte monocyte progenitor cell | 5.69e-14 | 67 |
myeloid lineage restricted progenitor cell | 7.30e-13 | 66 |
defensive cell | 1.02e-12 | 48 |
phagocyte | 1.02e-12 | 48 |
macrophage dendritic cell progenitor | 6.83e-12 | 61 |
monopoietic cell | 5.06e-11 | 59 |
monocyte | 5.06e-11 | 59 |
monoblast | 5.06e-11 | 59 |
promonocyte | 5.06e-11 | 59 |
myeloid cell | 1.05e-09 | 108 |
common myeloid progenitor | 1.05e-09 | 108 |
leukocyte | 2.30e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.59e-18 | 114 |
hematopoietic system | 1.46e-10 | 98 |
blood island | 1.46e-10 | 98 |
bone marrow | 1.75e-10 | 76 |
skeletal system | 2.39e-10 | 100 |
bone element | 9.58e-10 | 82 |
skeletal element | 1.39e-09 | 90 |
hemolymphoid system | 2.26e-09 | 108 |
immune system | 2.44e-08 | 93 |